Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq85 98.7 9e-16
seq58 93.3 4e-14
>seq85
Length=135120
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/200 (72%), Gaps = 9/200 (5%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||| || ||| || | || || ||||||||||| |||||
Sbjct 93990 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 94049
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC---AT----GATCTTTTGCT 35657
|| | ||||||||||||| || | | |||||||||| || |||||| ||
Sbjct 94050 GATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATNNTGGATCTTGGACT 94109
Query 35658 TCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAA 35716
| | |||| | | |||||| || |||||||| | |||||||| || ||||| |
Sbjct 94110 TGA-CGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGG 94168
Query 35717 GTTTTCACAAATATCTGCAT 35736
|| || || || ||||||||
Sbjct 94169 GTCTTGACGAAAATCTGCAT 94188
>seq58
Length=162708
Score = 93.3 bits (102), Expect = 4e-14
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| |||||||||||||||| | ||| || | || || |||||||| || || ||
Sbjct 44110 CTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 44169
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| |||||||| || | ||| | ||||||||| |||||| ||||| | |
Sbjct 44170 AATCAATCGCTGCTGATCAGGAGGGA--TNNTCCTTGTCCTGGATCTTGGACTTCACATT 44227
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| || || ||||| | ||||| || || || || | || || ||
Sbjct 44228 GTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGAC 44287
Query 35725 AAATATCTGCAT 35736
|| || |||||
Sbjct 44288 GAAGATTTGCAT 44299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450790861428880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |