Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq85 98.7 9e-16 seq58 93.3 4e-14 >seq85 Length=135120 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/200 (72%), Gaps = 9/200 (5%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || ||| || | || || ||||||||||| ||||| Sbjct 93990 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 94049 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC---AT----GATCTTTTGCT 35657 || | ||||||||||||| || | | |||||||||| || |||||| || Sbjct 94050 GATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATNNTGGATCTTGGACT 94109 Query 35658 TCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAA 35716 | | |||| | | |||||| || |||||||| | |||||||| || ||||| | Sbjct 94110 TGA-CGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGG 94168 Query 35717 GTTTTCACAAATATCTGCAT 35736 || || || || |||||||| Sbjct 94169 GTCTTGACGAAAATCTGCAT 94188 >seq58 Length=162708 Score = 93.3 bits (102), Expect = 4e-14 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||||| | ||| || | || || |||||||| || || || Sbjct 44110 CTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 44169 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| |||||||| || | ||| | ||||||||| |||||| ||||| | | Sbjct 44170 AATCAATCGCTGCTGATCAGGAGGGA--TNNTCCTTGTCCTGGATCTTGGACTTCACATT 44227 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||||| || || || || | || || || Sbjct 44228 GTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGAC 44287 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 44288 GAAGATTTGCAT 44299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450790861428880