Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq389 354 9e-93 seq380 102 9e-17 >seq389 Length=813516 Score = 354 bits (392), Expect = 9e-93 Identities = 1130/1731 (65%), Gaps = 45/1731 (3%) Strand=Plus/Minus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||| || | ||||||||||| ||||||||||| |||||| || | |||||| | Sbjct 462445 GTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGC 462386 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | | | |||| ||| | |||| || |||| |||||||| ||||| ||||| || | Sbjct 462385 TGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAA 462326 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 || | ||||| ||||| || ||||| | | ||| || | ||||||||| | | Sbjct 462325 TGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAG 462266 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGC 78425 || ||| | ||||| | ||| | |||||| | | ||| | | | |||| Sbjct 462265 TCTTGTACAGAGCCTTGATCTCGGCAGGGATGTT--GGGGATGTTCTGGATAGAACCGT- 462209 Query 78426 TCGCA-CAAT--TTCA-TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCC 78481 | || |||| | | ||||| || | | ||| || || | ||||||| Sbjct 462208 TATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCT 462149 Query 78482 GGA----CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAG 78537 || ||||| |||| | | ||||||||| || ||| ||||| ||||| Sbjct 462148 TGAGAAGCCAGG----GGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAG 462093 Query 78538 ATGTTGGTCGTGTACGGCTCGAAAGCCT-CGTTGTTCCCCATGATCTGGGCGGTCGAGGC 78596 ||||||| ||||| ||||| ||||| | ||||||| || | ||||| | ||| ||| Sbjct 462092 ATGTTGGAGGTGTAAGGCTC-AAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGC 462034 Query 78597 GGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT 78656 ||| ||||| || || || || ||| || || | ||| || ||||||| || | Sbjct 462033 GGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCG 461974 Query 78657 TAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGAT 78710 ||| | |||||||| ||| | | || ||||||||| || || || Sbjct 461973 GAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATTCCACATGTCGAACTGGAGAAT 461914 Query 78711 ACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTC 78770 |||||| || || || || |||||||| || ||| | || |||||||||||||||| Sbjct 461913 ACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTT- 461855 Query 78771 GCAT-GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGC 78829 ||| ||| ||||| |||||||| | | ||||||||| |||||| ||||| | Sbjct 461854 GCACAGACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCAC 461795 Query 78830 GCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGA 78889 | |||| | || || | | || ||| | ||| |||| || || || || | Sbjct 461794 GAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCA 461735 Query 78890 CGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAA 78949 | || | | | || |||||||| ||||||||||| || || ||| | | | ||||| Sbjct 461734 CACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGT 461675 Query 78950 AGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATT 79009 ||| ||||||| ||||| || || || || |||| ||||||| || | Sbjct 461674 GGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCT 461615 Query 79010 TGGCGAAATCAAA---ATGAT-TTCCT--TTGATGAAAGTCGGTAGGCACAGCGATGCCA 79063 | ||| || | | || ||| | ||||| |||| || || ||| || || | Sbjct 461614 TCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGACAAGGAGGCAA 461555 Query 79064 GGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAG 79123 ||||||| || || ||| || ||| | || ||||| || ||||||| || | Sbjct 461554 GGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGG 461495 Query 79124 ACGACTT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181 | ||| |||||| || | |||||| ||||| ||||| || ||| |||||||| Sbjct 461494 AG--CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTA 461437 Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241 | |||| | || | |||||||| ||| || |||| | ||| ||| | | | | Sbjct 461436 GAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTG 461377 Query 79242 GGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAA 79301 ||| || | ||| | ||||| | ||||| | ||||| | | || Sbjct 461376 AGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAA 461317 Query 79302 AGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTC 79361 | || || ||| || | ||||| ||||| |||| |||||||| || ||| || Sbjct 461316 TTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTC 461257 Query 79362 CTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTC 79421 ||| |||| || || |||||| || || |||||||| || || ||| ||||| Sbjct 461256 GCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTC 461197 Query 79422 GCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTC 79481 || || | |||||| | || || ||| || || || || || || | || ||| Sbjct 461196 ACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTC 461137 Query 79482 GGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTT 79541 ||||||||| || || || ||||||||||| | ||| |||||| || ||||||| Sbjct 461136 GGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTC 461077 Query 79542 GACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCC 79601 ||||| || || ||||||||||| || || |||||||| ||||| |||| || || Sbjct 461076 AACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACC 461017 Query 79602 GTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCG--AGCAGTGGATTCCGATG 79659 || || ||| ||| | || | || || | |||| | || | || || Sbjct 461016 ATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGA--TTCGGTGGGCGTTCAAGCCAATA 460959 Query 79660 CCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATC 79719 || || | | |||||| || || || |||||| || |||||||| || || || Sbjct 460958 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATG 460899 Query 79720 GAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCG 79779 ||| ||||||||| | || |||||||| || | ||| || | ||||||||| Sbjct 460898 CTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCG 460839 Query 79780 TTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTT--TTGGCTCATCAGATCGTACGTCT 79837 ||||| | || || | || || ||||||||||| ||| ||| || | ||| |||| Sbjct 460838 TTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTG--ACATGAGGTTGTATGTCT 460781 Query 79838 CCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888 || ||| ||| | ||||| || ||| || || ||||| ||||||| Sbjct 460780 CCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGA 460730 Score = 334 bits (370), Expect = 8e-87 Identities = 914/1378 (66%), Gaps = 34/1378 (2%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||||||||| || || ||| || ||||| | ||| ||| ||||||||| Sbjct 460730 TCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGTCTTGGAGACATACA 460789 Query 19176 ACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACG 19234 |||| ||| | || ||||||||||| || || | || || | |||||||||||||| Sbjct 460790 ACCTCATGT-CAAGCAAGTTCTTCACTCATGCAAGCCCCACTTTATTCAACGCCGGTACT 460848 Query 19235 AACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGC 19294 | || ||| | || || ||||| || | ||||||||| ||||||||||| || Sbjct 460849 CCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAGGACAGCATTGATGGT 460908 Query 19295 ATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATC 19354 |||||||| || |||||| || || || |||||| | | || ||||| || | Sbjct 460909 ATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCTTG 460968 Query 19355 CACTGCT--CGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG 19412 || | ||||| ||| | | ||| | ||| || || || || || Sbjct 460969 AACGCCCACCGAAT--CCGTGCCACTGGCTCTTACATCGCCGGTACCAATGGTACTTCCA 461026 Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 |||||||||| || ||||| || || ||||||||||| || | ||||| ||||||| | Sbjct 461027 ACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTTGACCAGGGTG 461086 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 | ||| || || | |||||||||||||| || ||||||||||| |||||| | | Sbjct 461087 GTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAACCATGGCACGCCGACGTCTTCG 461146 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 | ||||| || || || ||| || ||| | |||||| | ||| ||| ||||| ||| Sbjct 461147 AGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGCGCTCGTGACCTGTTCT 461206 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652 || | ||||| || || || |||||| || || |||| ||| |||||| | Sbjct 461207 TAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGAAACGGCGAATGGACTC 461266 Query 19653 TGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGT 19712 | |||||||| |||||||||||||||| | ||| |||||| || | || | | Sbjct 461267 TCATGTGCCCTAACGAATGCCCTGGCCTTGCTGACTGCTACGGTGACGAATTTGAGGCTC 461326 Query 19713 TGTACCGGACTTACG-TAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTC 19771 ||||| | |||| || || || || ||| || ||| | | | | Sbjct 461327 TGTACGAAAAGTACGAGAGAGAGGGTAAGGGTC-GCAAGTCTATCAAGGCTCAGAAACTT 461385 Query 19772 TGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGA- 19830 ||| || | | || | |||| |||||||| | || | |||| ||||||||| Sbjct 461386 TGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACCCTTTCATGCTCTACAAGGAT 461445 Query 19831 CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTCGTCCAACCTG 19888 | | || | || |||| || || |||||| | || | ||| ||| ||||||||| Sbjct 461446 CACTGCAATCG-CAAGAGTAACCAAAAGAACCTTGGTACCATCCGAAG--CTCCAACCTG 461502 Query 19889 TGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCC 19948 || ||||| ||||| || | | || || ||| || || || || || || ||| Sbjct 461503 TGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTGTTTGCAACCTTGCCTCC 461562 Query 19949 CTGTGCCTGCCGACTTTCGTCA------AGGCCTCCTCCTTCGACTTTGCCAAATTGTAC 20002 ||| ||||| |||| ||| | | | | || |||||| || || || Sbjct 461563 TTGTCTCTGCCCTCTTTTATCAACTATGAAGATGCTTGCTACGACTTCAAGAAGCTGCAC 461622 Query 20003 GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCG 20062 ||||| || | || || || ||| |||| ||||||| ||| ||||| Sbjct 461623 GAGGTCACTCAAGTTGTTGTCCGCAATTTGAACAAGATCATCGACGTCAACCACTACCCT 461682 Query 20063 ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGC 20122 | | | ||| || || || ||||| ||||| || || | | || || || || Sbjct 461683 GTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCATTGGTCTTGGTGTGCAAGGT 461742 Query 20123 CTGGCCGACG-TTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCT 20181 || || || | |||| || ||| || | | || || ||| |||| || ||||| Sbjct 461743 CTCGCTGATGCCTTTCTTG-CCCTCCGCATGCCCTTTGAGTCTCCTGAGGCTCGTGAGCT 461801 Query 20182 CAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC-TCCTGGAATCGTGCGAACTCG 20240 |||||| ||||||||| || | |||||||| |||| | || |||| |||||| Sbjct 461802 GAACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTACTACGTCTGTGC-AACTCG 461860 Query 20241 CCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCC 20300 |||| ||||| || || ||| || |||||||| || || || || |||||||| |||| Sbjct 461861 CCAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCTCCCCTGCCTCTGAGGGTATTCTCC 461920 Query 20301 AGCCGGACATGTGGGGCGTCA------CTGA-GAATGAGTTTTGGAGCGCCCTCAAGGTT 20353 || ||||||||| |||| |||| || | | ||| | ||||| | Sbjct 461921 AGTTCGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAAC-CCCTCCGAGAG 461979 Query 20354 GAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCG 20413 || ||||||| ||||| | |||||| ||||||| || || ||||| |||||| Sbjct 461980 GATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGCCTACCGCCAGT 462039 Query 20414 ACCGCCCAGATCATGGGGAACAACG-AGGCTTTCGAGCCGTACACGACCAACATCTAC 20470 ||| | ||||| | || ||||||| | ||||| ||||| ||||| ||||||||||| Sbjct 462040 ACCTCGCAGATTCTTGGCAACAACGAATGCTTT-GAGCCTTACACCTCCAACATCTAC 462096 >seq380 Length=646993 Score = 102 bits (112), Expect = 9e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 || || || ||||| | |||||||| ||| || || ||||||||| || | || Sbjct 392368 TTCGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT 392309 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | | || ||||||||||| ||||||||||||||||| || ||||| || || |||||| Sbjct 392308 GCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAG 392249 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCA 60118 || ||||| || || ||||| || || Sbjct 392248 CTCATTTCTCGTGATGAGGGTCTTCA 392223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548521467711840