Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq58 100 2e-16 >seq58 Length=162708 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 ||||||||||| | || || ||||| || || | |||||| | || || | ||||| Sbjct 43997 TGACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGACACTATCGACAACGTCAAGT 43938 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || || || ||||| || || || || || ||||| ||||| || || | |||||||| Sbjct 43937 CCAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATTTTCGCCGGCA 43878 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | || | || ||| || ||| | ||||| || ||||| || ||||| || ||| | | Sbjct 43877 AGCAGCTCGAGGACGGTCGAACCCTCTCCGACTATAACATCCAGAAGGAATCAACCCTTC 43818 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGG 27214 | |||| | ||| | || ||||| Sbjct 43817 ACCTGGTCCTTCGTCTTCGTGGTGG 43793 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || |||||| | || || || || || || | ||| Sbjct 44299 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 44240 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || ||||| || || || || ||||| Sbjct 44239 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGANN--ATCCCTCCTGATCAG 44182 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||||||||| || | || || | ||| | |||||||||||| Sbjct 44181 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGATTACAAC 44122 Query 27168 ATTCAAAAGGAGTCGAC 27184 ||||| ||||||||||| Sbjct 44121 ATTCAGAAGGAGTCGAC 44105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434915757870720