Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq85 91.5 1e-13
>seq85
Length=135120
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/204 (70%), Gaps = 7/204 (3%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||||||||| || |||||||| || || || || || |
Sbjct 94188 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 94129
Query 23671 GACACTGTTGA-AATATTAAAACAAAAA------ATTGCTGACAAAGAAGGTGTACCGCC 23723
||||| |||| || | || | || | || ||||| || ||| | || ||
Sbjct 94128 GACACCATTGACAACGTCAAGTCCAAGATCCANNATCCAGGACAAGGAGGGTATCCCCCC 94069
Query 23724 AGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGA 23783
|| || ||||| | || ||||| || || || || || || | ||||| | ||||
Sbjct 94068 GGACCAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGA 94009
Query 23784 TTACAACATACAAAAAGAGTCCAC 23807
|||||||| || || ||||||||
Sbjct 94008 CTACAACATCCAGAAGGAGTCCAC 93985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338007597926888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |