Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq85 91.5 1e-13 >seq85 Length=135120 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/204 (70%), Gaps = 7/204 (3%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||||||||| || |||||||| || || || || || | Sbjct 94188 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 94129 Query 23671 GACACTGTTGA-AATATTAAAACAAAAA------ATTGCTGACAAAGAAGGTGTACCGCC 23723 ||||| |||| || | || | || | || ||||| || ||| | || || Sbjct 94128 GACACCATTGACAACGTCAAGTCCAAGATCCANNATCCAGGACAAGGAGGGTATCCCCCC 94069 Query 23724 AGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGA 23783 || || ||||| | || ||||| || || || || || || | ||||| | |||| Sbjct 94068 GGACCAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGA 94009 Query 23784 TTACAACATACAAAAAGAGTCCAC 23807 |||||||| || || |||||||| Sbjct 94008 CTACAACATCCAGAAGGAGTCCAC 93985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007597926888