Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq389 181 1e-40 seq380 143 4e-29 >seq389 Length=813516 Score = 181 bits (200), Expect = 1e-40 Identities = 1163/1846 (63%), Gaps = 43/1846 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || ||||| || || | || || | | |||||| || |||||||| ||||| || ||| Sbjct 462473 GTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGA 462414 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || || |||| || ||| |||||||| || | ||| |||| || || Sbjct 462413 CCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATG 462354 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||| || | |||||| ||||| ||||| || || | ||||| ||||| | | | Sbjct 462353 TGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACA 462294 Query 76962 ATG-GTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG 77020 | ||| | ||| ||| ||||| | ||| ||| | | ||||| || | || | Sbjct 462293 ACCTGTCGCT-GAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGAT 462235 Query 77021 GTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATT 77077 ||| | | || || || ||||| ||| | || || ||||| ||| |||| Sbjct 462234 GTTGGGGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGA 462175 Query 77078 CCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCC 77137 ||| | | | || | | | | || || || || || | || || || || Sbjct 462174 CCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCC 462115 Query 77138 AGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 77197 || | |||| || ||| || || ||| || || || | |||| ||||| || Sbjct 462114 AGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCC 462055 Query 77198 CAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 77257 | ||| || | ||| || || |||||||| || || | | ||| || | || ||| Sbjct 462054 AAGAATCTGCGAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACC 461995 Query 77258 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATC 77317 || || ||| | ||| || || ||| |||||||| || || || |||| Sbjct 461994 GTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATT 461935 Query 77318 CCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGG 77377 ||| | ||| | || ||||| || | | ||| || || || | || || || Sbjct 461934 CCACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGG 461875 Query 77378 TCCTTCTGTTTCAGCTAGTT-CACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGA 77436 ||||| | || |||| |||| || | || ||| || || || |||| Sbjct 461874 ACCTTCCTCCTTGGCGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGA 461816 Query 77437 AAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAG--AAT 77494 | || | ||| || || || | || ||| | ||||| || ||| | | || Sbjct 461815 AGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAGGGC--ATGCGGAGGGCAAG 461758 Query 77495 AAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 77554 ||||||||| || | || || || |||| |||||| |||| || | | | ||| | Sbjct 461757 AAAGGCATCAGCGAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTT 461698 Query 77555 TTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAAC 77614 ||| ||| | | ||| || | || | ||| || || || || | ||| | ||||| Sbjct 461697 ACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAAC 461638 Query 77615 TACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCT--ATA----ACAAA 77668 |||| | || || | || || || || | | ||||| ||| | ||| Sbjct 461637 AACTTGAGTGACCTCGTGCAGCTTCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATAAA 461578 Query 77669 CATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTG 77728 | || || | || || || || ||||| || ||||||| || | | |||| Sbjct 461577 AGAGGGCAGAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTC 461518 Query 77729 TATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTT 77788 || ||||| || || || || | | ||| || || || || | |||||| ||||| Sbjct 461517 AATGATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTT 461458 Query 77789 TTTATTGCA-TGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGA 77847 |||||| ||| ||||| || || || || || | ||||| || |||| | || | Sbjct 461457 GCGATTGCAGTGA-TCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAA 461399 Query 77848 TAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCT---CTCTCTT 77903 ||| | | ||| | | ||| ||| || || ||| ||| | | | |||||| Sbjct 461398 GAATGGCGTACCAAA-GTTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTC 461343 Query 77904 TCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 || || || ||| | |||| |||||||| || || | ||| | | ||||||| Sbjct 461342 TCGTACTTTTCGTACAGAGCC--TCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGC 461285 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021 |||| || |||||||| | | ||| || || | | || || || ||||| || |||| Sbjct 461284 ATTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGAT 461225 Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081 |||| ||||| ||||| | || || || || | | || || || || ||||| Sbjct 461224 CAGGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCT 461165 Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141 || ||||| || ||||| | | || | ||||||||||| || || || || | Sbjct 461164 TTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGG 461105 Query 78142 CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCA 78201 | |||||||| || ||||| ||||| || | || | || ||||| || | || | || Sbjct 461104 CACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCA 461045 Query 78202 ACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGC 78261 ||| |||| |||||||| || || ||||| || || | || ||| ||| | || | Sbjct 461044 GCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCAC 460985 Query 78262 GAATATTACTAATGGAT-ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT 78320 | || | | | | | || || || || |||||||| || || | || ||| Sbjct 460984 GGAT-TCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTC 460926 Query 78321 TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380 || | |||||||||||||| || || ||||| ||| |||| | || ||| || || Sbjct 460925 TTGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAT 460866 Query 78381 GACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440 || | ||| | || ||| || || || ||||| || || |||||| || || | Sbjct 460865 GAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAAC 460806 Query 78441 TTTTCAGAAAGTAGATTGTATGT-TTCAATA---GCTGATTCTATGTC-CCATTGATGAA 78495 || || | || |||||||| | ||| | ||| | | | ||| || | | Sbjct 460805 TTGCTTGACATGAGGTTGTATGTCTCCAAGACACGCTCAATAT-CGTCACCCCAG----A 460751 Query 78496 TTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTT 78555 |||| || || || ||||| | ||||||||| || | ||| | | || | || | Sbjct 460750 TTCCAACAGCGACTCGCATGATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCT 460691 Query 78556 TCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601 | |||||||||| | ||| ||| || |||||||||||||| Sbjct 460690 GTAGCAAGTATGATCTGGACAAGGTTCGGAAGCCAAAATAGTTGTA 460645 >seq380 Length=646993 Score = 143 bits (158), Expect = 4e-29 Identities = 370/561 (66%), Gaps = 12/561 (2%) Strand=Plus/Plus Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199 ||| ||||| || |||||||| ||||| | | ||| | ||||||||||| | || Sbjct 392207 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 392266 Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259 ||| ||||| || ||||| || |||||||| || || | || || | || ||||| Sbjct 392267 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 392326 Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---G 48316 || || || ||||| ||||| || ||| | || || | | | | || | | Sbjct 392327 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGGTAGAGTTCTTATCCTG 392386 Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 48376 ||||| || |||||||| |||||||| | ||||| || || || | || || Sbjct 392387 GATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTT 392446 Query 48377 AAAGAGAAAGtttttttCATTGCTA---TCTTTAACGTAAGTATCTATTAAAAGACTATA 48433 ||||| || | | | | | || || | ||| ||||| || | || || Sbjct 392447 GAAGAG---GTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTA 392503 Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493 |||||||||| || || || || ||||| || || || || |||| || || | Sbjct 392504 TGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGG 392563 Query 48494 GATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGC 48553 |||||| ||||| | ||||| ||| | | ||||||||| || || || || || Sbjct 392564 GATCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGC 392623 Query 48554 AGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATT 48610 ||| || || || | | || || || |||| |||| ||||||| | || || Sbjct 392624 AGCGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTT 392683 Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 |||||| | || ||| || || | ||| | || ||||||||||| || || |||||||| Sbjct 392684 CCAGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGC 392743 Query 48671 TTTTTTATACATATTCCATAT 48691 || || ||||| | ||| || Sbjct 392744 CTTCTTGTACATTTGCCAGAT 392764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664579887040