Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717905.1_202016-08-31] 303 sequences; 36,666,367 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq202 113 5e-20 >seq202 Length=398012 Score = 113 bits (124), Expect = 5e-20 Identities = 191/273 (70%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 |||||||| |||||||| || ||||||||||||| || |||||| | || || ||| Sbjct 248033 AGCTGGTCTACGCCCTGGCCGGTATAATCTGTCTTGGCATCGACGTACTCAGCGCCAAAG 248092 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCG 146115 |||| ||| ||||| ||||| || || || ||||| ||| ||| | || || || Sbjct 248093 TGCCGCCATTGGAAGCCGTATACAGGACCTAGGTCGCCGACCTCACGATGTTGAAGACCA 248152 Query 146116 GCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGG 146173 |||| || || || || ||||| | ||||||||||||| || |||| | | Sbjct 248153 AGGTTATCGAGAAATTCGCGCGAGCCGTTTCCATCCCAGATCTTGATACCGGCCTCACTG 248212 Query 146174 AGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCC 146233 ||| ||| ||||| ||| ||| ||||||||||| ||||| | | ||| | | Sbjct 248213 AGA-CTC-TTGGAAGAGGTGTTACCCTCAATGAACCAGAGGAGCTCGGCAATGACGGCGC 248270 Query 146234 TCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||||| | ||| ||||| || ||||||| Sbjct 248271 GAGTGAAGACACGCTTCGTGGTAAGGAGGGGGA 248303 Score = 91.5 bits (100), Expect = 2e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 || |||| ||| |||| || ||||| | |||||| || || || || |||| ||| ||| Sbjct 247670 AGTTGGACCTTGAGGGCATCAACGTGATCGAGGTACACATGAGCATCACCCATGACATGG 247729 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | | | || || | || | || ||| || | ||||| |||||||| | |||| Sbjct 247730 GTAAGGCTTCCAGGGACCAGCTCACAGACGTGTGCCATCATGTGTGTCAGCAGCGCGTAG 247789 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || || ||||||||||| || ||||| |||||||| | || || || || | ||| ||| Sbjct 247790 CTAGCAATGTTGAAGGGAACGCCCAGACCCATGTCGCAAGATCGTTGATATAACTGACAG 247849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074565084120