Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717905.1_202016-08-31]
303 sequences; 36,666,367 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq38 257 1e-63
seq291 143 2e-29
seq189 91.5 1e-13
>seq38
Length=1092239
Score = 257 bits (284), Expect = 1e-63
Identities = 621/936 (66%), Gaps = 8/936 (1%)
Strand=Plus/Minus
Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086
|||||||| ||||| || || ||||| || || ||| || | || || || ||
Sbjct 463333 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCAC 463274
Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146
|| ||| | || || || | || | ||||| || || |||||||| ||||
Sbjct 463273 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCC 463214
Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206
|||||||||||| | || | || ||||| ||| | ||| | || || ||| |
Sbjct 463213 TTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGT 463154
Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGC 23265
||||||| | | | | | || ||| || ||| ||||||||||| ||||| ||
Sbjct 463153 TTCTGAGCCTTGATA-GACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGC 463095
Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325
||||||||| ||||||| ||||| || ||||| || ||| | || ||||||||| |
Sbjct 463094 CTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGT 463035
Query 23326 CCACATTGAGTCATTT---TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382
||| | | | ||| || || || |||| |||||||| || ||||| ||||| |
Sbjct 463034 CCA---TTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAA 462978
Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTC 23442
|||||| || || ||||| |||||||| || ||| |||||| | ||| | || ||
Sbjct 462977 GAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTC 462918
Query 23443 CAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCC 23502
|| ||||| || ||||| || || ||||| | ||| || || || |||| ||| || ||
Sbjct 462917 GAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACC 462858
Query 23503 GCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTT 23562
||||| || |||||||| || ||||||||| |||| | ||||| || |||| ||||||
Sbjct 462857 ACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTT 462798
Query 23563 GGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAA 23622
||| | || || || | || || | || || | ||| ||| ||
Sbjct 462797 GGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAA 462738
Query 23623 ACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCC 23682
|| || || || || || || ||||| || || || || || |||||||| ||
Sbjct 462737 GCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACC 462678
Query 23683 CTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGT 23742
|| ||||||||||| || | | || | ||| || || || | || | | || ||
Sbjct 462677 ATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGT 462618
Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTA 23802
| |||| ||| | || ||||| || || || ||| | | ||||| || |||||
Sbjct 462617 ACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTA 462558
Query 23803 CGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCAT 23862
|| || | | | ||||| || || || || || | ||||| ||||| |||||
Sbjct 462557 TGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGATCAT 462498
Query 23863 GTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922
| || || | ||| | | ||||| ||| | | || ||||| | || ||
Sbjct 462497 ATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCTGGACAAGGT 462438
Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATC 23958
| || |||||||||| ||||| ||||| |||||
Sbjct 462437 TCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGATC 462402
Score = 105 bits (116), Expect = 6e-18
Identities = 224/331 (68%), Gaps = 4/331 (1%)
Strand=Plus/Minus
Query 22241 TTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAA--TG 22298
|||| |||||| |||||| || || || || || || || ||||| | | ||| ||
Sbjct 464119 TTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCA-CAACCTG 464061
Query 22299 TACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATT 22358
| ||| || || ||||| || ||||||||||| | ||||||| || ||
Sbjct 464060 T-CGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGG 464002
Query 22359 CGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACA 22418
||| |||||| || ||||||| ||||| || || || | |||| ||| |
Sbjct 464001 GGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAA 463942
Query 22419 AACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACA 22478
||| ||| || | ||| |||| || |||| || || || |||||||| | |
Sbjct 463941 GACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAA 463882
Query 22479 AGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTA 22538
||| ||||||||||| |||||||| ||| | || || || |||| ||||| || || |
Sbjct 463881 GGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAA 463822
Query 22539 TCTGAGCGGTCGAAGCGGTCGGCATCGGCGC 22569
|||| | ||| ||||| ||||| || ||
Sbjct 463821 TCTGCGAGGTACTGGCGGTAGGCATAGGAGC 463791
>seq291
Length=442874
Score = 143 bits (158), Expect = 2e-29
Identities = 455/701 (65%), Gaps = 37/701 (5%)
Strand=Plus/Minus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| |||||||| || || || ||||| | || || | || ||
Sbjct 1445 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 1386
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAAT-CTGA-GAGAAAT--TTTATTAA 57685
|| |||||||| ||| ||| | || | || | | || ||| ||| || ||
Sbjct 1385 TCCAAGGATCTCCACGACTGGAACAACCG-ATTGACTTCAGACGAGCAATACTTCATCTC 1327
Query 57686 ACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAG 57745
||| | | || || ||||| || ||||| || || || || |||||| | || || |
Sbjct 1326 CCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCG 1267
Query 57746 ATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805
||| || || || | | ||||| ||||||| || || || || | ||
Sbjct 1266 ATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGAT 1207
Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865
|| ||| | || || |||| || || || ||||||||||| ||| | |||||| |
Sbjct 1206 GGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTGC 1147
Query 57866 CGAGAAACGTAGA---CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922
| || |||| | || |||||||| | || || || || ||| ||||||||
Sbjct 1146 CCAG---CGTACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGGC 1090
Query 57923 AGAGTGGTCAATCAAATGGATAAA----AAGCGCCACGGCCACGTTCGCCGAGAGGCTAA 57978
|| ||| | ||| |||||| | ||| | | || ||||| || | ||
Sbjct 1089 GGATTGGGCCATCCGATGGATCCAGGATAAGAACT----CTACCTTCGCTCAGCGTCTTG 1034
Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038
| || || || ||||| || ||||| ||||| || |||||| | || || |||
Sbjct 1033 TTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGC 974
Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098
| ||||| || ||||| ||||| || |||| ||| |||||| | || || || ||||
Sbjct 973 TCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGACG 914
Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT---------TGTCAATA 58149
||||||| || || || ||||| || || | |||||||| | || || |
Sbjct 913 AGGGTCTTCACACCGACTTTGCCTGTCTCCTCCACTCTCACCTCAAGGGACGTGCCAGCA 854
Query 58150 AACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGT 58209
||| || | ||| ||||||||||||||| || || | || || | ||||
Sbjct 853 AACAGATG---------ATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGAGT 803
Query 58210 TTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAAC 58250
|| | || || || || || ||| ||||||| ||||||
Sbjct 802 TTCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAAC 762
>seq189
Length=836686
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| |||||||| ||||| || || || || ||||||||| | || || || | ||
Sbjct 312565 CATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTC 312506
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| | || | ||||| | || ||||||||| || | || || |||||
Sbjct 312505 CGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 312446
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || || ||||| || ||| | || || || ||||||| || ||
Sbjct 312445 GCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAA 312386
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || || || ||||| |||| ||
Sbjct 312385 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCT 312353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445764711659760
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