Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717905.1_202016-08-31] 303 sequences; 36,666,367 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq38 154 2e-32 seq291 136 5e-27 >seq38 Length=1092239 Score = 154 bits (170), Expect = 2e-32 Identities = 626/972 (64%), Gaps = 16/972 (2%) Strand=Plus/Minus Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCA 65800 || || || || ||||| || ||||||| || | ||| |||| || ||||||||||| Sbjct 463333 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGC-GCAGTATTCAATGATCTCAGTGCA 463275 Query 65801 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 65860 || || | |||||| || | || | ||| |||||||| || || ||| Sbjct 463274 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATC 463215 Query 65861 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 65920 ||| || || ||||| || | || || || |||| | || | ||| || | ||| | Sbjct 463214 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAA- 463156 Query 65921 GACTC-GAGCCTTTATTATAGATTTGTATCTCTTT---TCTCTTTCGTATAGTGTATACA 65976 | || ||||||| || ||| ||| | ||| ||||| ||||| | |||| Sbjct 463155 GTTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACA 463099 Query 65977 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACACATC 66035 || || ||||| || | || | ||| ||||| ||||| | || ||||| Sbjct 463098 GAGCCTCAAATTCGTCACCGTAG-CAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATG 463040 Query 66036 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 66095 | | ||| || |||| || || || ||||| || |||||||| |||||||||||| Sbjct 463039 AGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCT 462980 Query 66096 ATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 66155 | || | || | | | ||||| || || ||||||| ||||| |||||| Sbjct 462979 AAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAAC 462920 Query 66156 GCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 66215 | | | || ||||| ||||| | ||| ||||| | | ||||| || ||||| Sbjct 462919 TCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTA 462860 Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275 || ||||| || | ||| | ||| ||||| || | || | || ||| |||| ||||| Sbjct 462859 CCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCG 462800 Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT 66335 ||||| ||||||||||| |||| ||| || ||| | ||||| || | | | | Sbjct 462799 TTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGAT-TCGGTGGGCGTT 462741 Query 66336 -AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394 | || || || || ||||| || || || | || || || | ||||| ||||| Sbjct 462740 CAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGAT 462681 Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 66454 || || || || || ||| |||| | || || || || || | || | | Sbjct 462680 ACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGG 462621 Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514 ||| || || || ||||| || || || || || || | || || | || || Sbjct 462620 AGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTT 462561 Query 66515 GTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTA 66573 ||| ||||| | | || ||||| || | ||||| || ||||| ||||| | Sbjct 462560 GTATGTCTCCAAGACACGCTCAATATCGTCACCCCAG-ATTCCAACAGCGACTCGCATGA 462502 Query 66574 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 66633 ||| ||||| || | ||| | || ||| || || | | |||||| ||| | || Sbjct 462501 TCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCTGGACA 462442 Query 66634 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 66693 | ||| || |||||||||||||| ||||| || || || | ||| | |||| || Sbjct 462441 AGGTTCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGATCATAGACAATCGCTGAGTCGA 462382 Query 66694 GTTTATCCTTAT 66705 ||| || |||| Sbjct 462381 GTTCCTCTTTAT 462370 >seq291 Length=442874 Score = 136 bits (150), Expect = 5e-27 Identities = 368/559 (66%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216 ||| || || ||| ||| ||||||||||| | | ||| | ||||| ||||| | || Sbjct 888 ACAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 947 Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276 || ||||| ||||||||||| || ||||| || ||||| ||||| | || ||||| Sbjct 948 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 1007 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATG 36333 || || || || || ||||| |||| ||| | || | | | | | || || Sbjct 1008 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGGTAGAGTTCTTATCCTG 1067 Query 36334 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 36392 ||||| | || |||||||| ||||||||| | ||||| || || || | || | Sbjct 1068 GATCCATCGGATG-GCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 1126 Query 36393 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 36452 | ||||| || | | | || || | || ||||| || | || || Sbjct 1127 TGAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATG 1186 Query 36453 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 36512 |||| || || ||||| || || || || || || ||||| |||| |||||||| | Sbjct 1187 TTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGA 1246 Query 36513 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 36572 |||| || || | ||||| || | | ||| ||||| || || ||||| ||| | Sbjct 1247 TCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAG 1306 Query 36573 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGT---TAGTTTATTCC 36629 | || || || | | || || || |||| |||| || || | | || |||| Sbjct 1307 CGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCC 1366 Query 36630 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689 | || | || ||| || || | ||| | || || ||||||| || || |||||||||| Sbjct 1367 AGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCT 1426 Query 36690 TTTTATACATATTCCAGAT 36708 | || ||||| | |||||| Sbjct 1427 TCTTGTACATTTGCCAGAT 1445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658170307170520