Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717905.1_202016-08-31] 303 sequences; 36,666,367 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq38 161 1e-34 seq291 147 3e-30 >seq38 Length=1092239 Score = 161 bits (178), Expect = 1e-34 Identities = 1076/1708 (63%), Gaps = 67/1708 (4%) Strand=Plus/Minus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 464221 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 464162 Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707 || || | |||| | || || | |||| | ||| | | || || ||| Sbjct 464161 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 464102 Query 113708 TCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 113764 || |||||| ||||| || || ||||| | |||| ||| || || ||| Sbjct 464101 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 464045 Query 113765 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAG 113824 |||||||| |||| || ||| || || | ||||| | ||| || ||||| || Sbjct 464044 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 463985 Query 113825 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 113881 || | | || ||| || | | ||||||| | | ||||| ||||| || | Sbjct 463984 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 463928 Query 113882 AGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 113938 ||||||| |||| || |||||||| ||||| || || ||| || | Sbjct 463927 AGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGT 463871 Query 113939 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTG 113998 | ||||| |||| ||||| ||||||||||| || ||||| || | || || | ||| Sbjct 463870 TGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTA 463811 Query 113999 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 114058 ||| || ||||| || || | ||| || ||||| |||| ||| | | | | Sbjct 463810 CTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCC 463751 Query 114059 TCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 114116 || ||||| |||||||| | | | || | || | | |||||| || |||| Sbjct 463750 TCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAACT 463693 Query 114117 GGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCG 114176 |||| ||||| | ||||| || || |||| || || ||| || || || ||| | Sbjct 463692 GGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGG 463633 Query 114177 CCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235 | | || | || || ||||| ||||| || || ||||| || || | ||| Sbjct 463632 CGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 463574 Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295 | | ||||| || ||||| | | ||| || ||| |||| |||||| Sbjct 463573 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGA 463514 Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG 114355 ||||| ||||| || ||||| || || || | ||| || || ||||| | || Sbjct 463513 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACA 463454 Query 114356 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 114415 || || || ||||| | | | || | ||| | ||||| | |||| || Sbjct 463453 GGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCG 463394 Query 114416 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCG 114472 || ||||| | | | || | || || ||||||| ||| | | || || | Sbjct 463393 TGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGAC 463337 Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 | || || || || || |||| | |||||| | ||| || || || || || Sbjct 463336 AAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTG 463277 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTACACG 114590 |||| || || || ||||| || | ||||||||| || ||| ||| | || || Sbjct 463276 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTGCAGT 463219 Query 114591 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 114650 ||||||||| |||||| | || | || ||||| || |||| || ||||| || | || Sbjct 463218 GATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACC 463159 Query 114651 AGACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTT 114703 | | | | | | || | | | ||| || |||| |||| |||||||||| Sbjct 463158 AAAGTTTCTGAGCCTTGA----TAGACTTG---CGACCCTTACCCTCTCTCTCGTACTTT 463106 Query 114704 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT-GG 114762 ||| || || ||||| || ||||| | || | || || || || || | || Sbjct 463105 TCGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGG 463047 Query 114763 GCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCA 114822 ||| | ||||| ||||| || ||| |||||||||||||| || || |||||||| Sbjct 463046 GCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCA 462987 Query 114823 GAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 114882 |||||| |||| || || ||| ||| | || || | || ||||| || | || Sbjct 462986 AAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATC 462927 Query 114883 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 114942 | || || | || || |||||||| ||||| ||||| | |||| | || | | Sbjct 462926 AAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACC---AGG 462870 Query 114943 ACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGG 114996 || |||| |||||| || || | || ||| || || || || ||||| || Sbjct 462869 TCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGG 462810 Query 114997 AATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACA 115054 || |||||| | || ||||| || || ||| || ||| | | |||| | || Sbjct 462809 AACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGATT 462752 Query 115055 TCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 115114 ||| || || |||||||| || ||| ||| || || || || | |||| Sbjct 462751 CGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGG 462692 Query 115115 CTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATT 115174 | ||||||| || || || ||| |||| | | | ||||||||| || | Sbjct 462691 GTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGC 462632 Query 115175 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG- 115233 || ||| ||| ||||| |||||||| | || || | || || ||| | | |||| Sbjct 462631 TGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGC 462574 Query 115234 -GGACATCTTATCGTAGGTCTCCAAGAC 115260 ||||| | ||| ||||||||||| Sbjct 462573 TTGACATGAGGTTGTATGTCTCCAAGAC 462546 >seq291 Length=442874 Score = 147 bits (162), Expect = 3e-30 Identities = 534/821 (65%), Gaps = 31/821 (4%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||||||||| ||||| ||| | | | ||| |||||||| Sbjct 603 GTAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCAT 662 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 125871 || || || ||||| | || || | | | |||| | | ||| ||| Sbjct 663 GAAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCAAC------GAG 716 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 ||||||||| | |||| | || ||||||| ||| | |||||||| |||| || Sbjct 717 GAGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAG 776 Query 125932 GTTACATGGGAGCGCGTCC--AAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACG 125989 | ||| ||||| || || |||| ||| ||| |||||| ||||| || | Sbjct 777 GGCACAAGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATA 834 Query 125990 ATGGCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG 126046 ||| | || || | | | || ||| ||| | || | || ||| || | Sbjct 835 ATGTCCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-G 891 Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| |||||||||||||| || ||||| || || || |||| ||| || Sbjct 892 GCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCA 951 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 |||||||| || |||||||| | |||||| || | | ||| | ||| ||||||||| Sbjct 952 GGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATA 1011 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG-AGCGCGACTTTGTGTCAAA 126225 ||||| || || || |||| ||||||| ||| |||| || | ||| | | Sbjct 1012 CCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGGTAGAG-TTCTTATCCTGGAT 1070 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 ||| || ||||| | |||||| || ||| || || | || | | || | || Sbjct 1071 CCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTTGAA 1130 Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 ||| | | | | || || |||||||| |||| ||||| || |||||||| Sbjct 1131 GAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATGTTTC 1190 Query 126346 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 126404 | ||||| | | ||| || | ||| | | ||||| | || || ||| |||| Sbjct 1191 GGAGTGGATGTTCTCCATCAT-GATCTGGAAACCATAGAAGCATCGAGCCTCGGGGATCT 1249 Query 126405 GTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 126463 | ||||| | || ||| | | | | ||||||| || || || ||||| |||| Sbjct 1250 GGACCTC-GCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAGCG 1308 Query 126464 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 126520 || || || || || | ||||| | || || | ||| || | |||||| Sbjct 1309 AAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCCAG 1368 Query 126521 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||| |||||||| |||||||| | |||||| || ||||| Sbjct 1369 TCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCA 1409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351337523240