Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717905.1_202016-08-31] 303 sequences; 36,666,367 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq38 205 1e-47 seq291 104 3e-17 >seq38 Length=1092239 Score = 205 bits (226), Expect = 1e-47 Identities = 1099/1736 (63%), Gaps = 45/1736 (3%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| |||||||| || |||||||| || | ||||| | | ||||| | | Sbjct 464212 CGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 464153 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 | |||| ||| || || | |||| || || | | ||| ||| ||||||||| Sbjct 464152 ATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAG 464093 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTG 105766 |||||| | || ||||| | | || ||| || || |||||||| || Sbjct 464092 GCACCACGGTCAGCAGCCATCTGCA---CAACCTGTCGCTGAGAAATCTCCCACACAGTC 464036 Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCC---CC 105823 ||| ||| |||||| || | ||||| | | ||| || || || ||||| | Sbjct 464035 TTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCA 463976 Query 105824 GCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTG 105883 || ||| || | | ||||||| | | |||||||||||| || | ||||| ||| Sbjct 463975 GCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTG 463919 Query 105884 ACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTC 105943 | || |||||||| | ||||| || || ||| || | | |||||||| Sbjct 463918 AGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTG 463859 Query 105944 GTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGC 106003 | ||||| || ||||||||||| || || || | || || | ||| ||| || ||| Sbjct 463858 GAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGC 463799 Query 106004 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA 106063 || || || | | |||||||| || | ||| | ||||| || ||| Sbjct 463798 ATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGT 463739 Query 106064 TCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121 |||||||| | | | || || || || |||| |||| || || || || | || | Sbjct 463738 TCCCAGTCCCAAAGGTCAGAG-GGCTTGACATTCC-ACATGTCGAACTGGAGAATACCCT 463681 Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAG 106180 || | || || |||| || || |||| ||||| | | || | || ||||| Sbjct 463680 CAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTTGCACAG 463621 Query 106181 CTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCT 106240 || |||| ||||| || ||||| || ||||| | |||| ||| || Sbjct 463620 A-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCC 463562 Query 106241 TCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 106300 ||| || ||||| | |||| || ||| |||| ||||||||||| ||||| Sbjct 463561 TCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCACACCA 463502 Query 106301 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTT 106360 | |||||| |||| ||| ||||| || || || || | || || || || Sbjct 463501 AGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTG 463442 Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420 ||| |||| ||| | ||| | ||||| | |||| || || || || | Sbjct 463441 ACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCTTCTTG 463382 Query 106421 TAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAA 106477 | || | || || ||||||| ||| | | || || | | || || | Sbjct 463381 AAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGACAAGGAGGCAAGG 463325 Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 ||||||||||| |||||| | ||| || | || || || |||| |||||| Sbjct 463324 TTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAG 463265 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 || || || || | ||||||||||||||||| ||||| ||||||||||||| Sbjct 463264 CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGC 463205 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACAT-CGGCGGC 106656 ||| | || | || ||||| ||||| | || ||||| || | ||| | | | | | | Sbjct 463204 ATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCC 463145 Query 106657 TGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 | | || | | ||| ||| | ||||| |||||||||| ||| || || ||||| Sbjct 463144 TTGATAGACTTGCGA---CCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAAT 463088 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTG 106773 || ||||| ||| | || || || || || || || || | |||| ||||| Sbjct 463087 TCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGGCACATGAGAGTCCATTC 463029 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 || ||| || |||||||||||||| || || ||||| || | | | || || || Sbjct 463028 GCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTC 462969 Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893 | | || |||| || | ||| || || ||| | ||||||||||| | || || Sbjct 462968 ACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTC 462909 Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTG 106947 ||||||||||| ||||| |||| |||| || || ||| | ||| | || Sbjct 462908 GGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTA---CCACCCTG 462852 Query 106948 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 107007 | || || || || ||| ||| || || || ||||| |||| ||||| | || Sbjct 462851 GTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGT 462792 Query 107008 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAAT 107067 |||||| || || || ||| | |||| | | ||| || || ||||| Sbjct 462791 ACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAAT 462732 Query 107068 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 107127 ||| |||||| ||| || || ||||| | | || || | |||||||| | || Sbjct 462731 ACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAAT 462672 Query 107128 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 107187 ||||||||| | | | ||||||||| || | ||| || ||| ||||| || Sbjct 462671 GCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGC 462612 Query 107188 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTC 107245 ||||| | || || |||| ||| ||| | | |||| ||||| || ||||||| Sbjct 462611 GTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTGACATGAGGTTGTATGTC 462554 Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 ||||||||| ||||| || || || ||| || | || || ||||| | ||| Sbjct 462553 TCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGATCAT 462498 >seq291 Length=442874 Score = 104 bits (114), Expect = 3e-17 Identities = 304/460 (66%), Gaps = 24/460 (5%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct 604 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 663 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099 ||||| || || || | | || | | | | || | | |||| |||| Sbjct 664 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCAAC------GAGG 717 Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159 |||||||| | || | || ||||||| ||| | |||||||| |||| || Sbjct 718 AGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGG 777 Query 117160 TTACATGGGAGTGCGTCC--AAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGA 117217 ||| ||||| || || |||| ||| | | |||||| ||| || || | | | Sbjct 778 GCACAAGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATAA 835 Query 117218 TGGCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGG 117274 || | ||||| | | | ||| ||| || | || | || ||| || || Sbjct 836 TGTCCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GG 892 Query 117275 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTG 117334 |||| || ||| |||||||| || || ||||| || || || || |||| || || | Sbjct 893 CAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCAG 952 Query 117335 GCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATA 117393 ||||||| || |||||||| | ||| | || | ||| || | ||| |||||||||| Sbjct 953 GCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATA 1011 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 ||||| || ||||| |||| ||| |||| ||||||| Sbjct 1012 CCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGG 1051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978565447720