Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717905.1_202016-08-31]
303 sequences; 36,666,367 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq187 95.1 2e-14
>seq187
Length=1074518
Score = 95.1 bits (104), Expect = 2e-14
Identities = 163/237 (69%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||| | | || || || || || | || | ||| || || ||
Sbjct 440112 AATTTGCATACCACCACGAAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTT 440171
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|||||||| | || | ||| || | || || ||||| ||||| |||| ||| ||
Sbjct 440172 GTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTG 440231
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||||||||| || || || || || || || |||| || | ||| || || |||||
Sbjct 440232 ATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGA 440291
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || || || || ||||| || || || || || ||||||||
Sbjct 440292 TGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 440348
Score = 84.2 bits (92), Expect = 4e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
|| || ||||| ||||| |||| ||| ||||||||||| || || || || || || ||
Sbjct 440431 TGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATC 440490
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|||| || | || |||||||| || |||||||| || || || ||||| || ||
Sbjct 440491 TTGGACTTGACGTTGTCGATAGTATCAGATGACTCAACCTCGAGGGTAATAGTCTTGCCG 440550
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
|| | || || || || || |||||
Sbjct 440551 GTCAAGGTCTTGACGAAGATCTGCAT 440576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899650992558960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |