Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717905.1_202016-08-31] 303 sequences; 36,666,367 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq189 111 1e-19 seq187 93.3 4e-14 >seq189 Length=836686 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || ||| || | || || ||||||||||| ||||| Sbjct 312373 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 312432 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | |||||||||| |||||| ||| | || Sbjct 312433 GATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 312491 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | |||||||| || ||||| | || || | Sbjct 312492 TGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 312551 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 312552 CGAAAATCTGCAT 312564 >seq187 Length=1074518 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | ||| || | || || |||||||| || || || Sbjct 440385 CTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 440444 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| |||||||| || | ||| | || |||||||||| ||||| ||| | || Sbjct 440445 AATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGT 440503 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || || ||||| | || || || || || ||||| || || | Sbjct 440504 TGTCGATAGTATCAGATGACTCAACCTCGAGGGTAATAGTCTTGCCGGTCAAGGTCTTGA 440563 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 440564 CGAAGATCTGCAT 440576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791892619240