Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717905.1_202016-08-31] 303 sequences; 36,666,367 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq38 354 9e-93 seq291 105 7e-18 >seq38 Length=1092239 Score = 354 bits (392), Expect = 9e-93 Identities = 1130/1731 (65%), Gaps = 45/1731 (3%) Strand=Plus/Minus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||| || | ||||||||||| ||||||||||| |||||| || | |||||| | Sbjct 464217 GTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGC 464158 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | | | |||| ||| | |||| || |||| |||||||| ||||| ||||| || | Sbjct 464157 TGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAA 464098 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 || | ||||| ||||| || ||||| | | ||| || | ||||||||| | | Sbjct 464097 TGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAG 464038 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGC 78425 || ||| | ||||| | ||| | |||||| | | ||| | | | |||| Sbjct 464037 TCTTGTACAGAGCCTTGATCTCGGCAGGGATGTT--GGGGATGTTCTGGATAGAACCGT- 463981 Query 78426 TCGCA-CAAT--TTCA-TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCC 78481 | || |||| | | ||||| || | | ||| || || | ||||||| Sbjct 463980 TATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCT 463921 Query 78482 GGA----CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAG 78537 || ||||| |||| | | ||||||||| || ||| ||||| ||||| Sbjct 463920 TGAGAAGCCAGG----GGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAG 463865 Query 78538 ATGTTGGTCGTGTACGGCTCGAAAGCCT-CGTTGTTCCCCATGATCTGGGCGGTCGAGGC 78596 ||||||| ||||| ||||| ||||| | ||||||| || | ||||| | ||| ||| Sbjct 463864 ATGTTGGAGGTGTAAGGCTC-AAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGC 463806 Query 78597 GGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT 78656 ||| ||||| || || || || ||| || || | ||| || ||||||| || | Sbjct 463805 GGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCG 463746 Query 78657 TAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGAT 78710 ||| | |||||||| ||| | | || ||||||||| || || || Sbjct 463745 GAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATTCCACATGTCGAACTGGAGAAT 463686 Query 78711 ACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTC 78770 |||||| || || || || |||||||| || ||| | || |||||||||||||||| Sbjct 463685 ACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTT- 463627 Query 78771 GCAT-GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGC 78829 ||| ||| ||||| |||||||| | | ||||||||| |||||| ||||| | Sbjct 463626 GCACAGACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCAC 463567 Query 78830 GCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGA 78889 | |||| | || || | | || ||| | ||| |||| || || || || | Sbjct 463566 GAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCA 463507 Query 78890 CGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAA 78949 | || | | | || |||||||| ||||||||||| || || ||| | | | ||||| Sbjct 463506 CACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGT 463447 Query 78950 AGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATT 79009 ||| ||||||| ||||| || || || || |||| ||||||| || | Sbjct 463446 GGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCT 463387 Query 79010 TGGCGAAATCAAA---ATGAT-TTCCT--TTGATGAAAGTCGGTAGGCACAGCGATGCCA 79063 | ||| || | | || ||| | ||||| |||| || || ||| || || | Sbjct 463386 TCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGACAAGGAGGCAA 463327 Query 79064 GGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAG 79123 ||||||| || || ||| || ||| | || ||||| || ||||||| || | Sbjct 463326 GGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGG 463267 Query 79124 ACGACTT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181 | ||| |||||| || | |||||| ||||| ||||| || ||| |||||||| Sbjct 463266 AG--CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTA 463209 Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241 | |||| | || | |||||||| ||| || |||| | ||| ||| | | | | Sbjct 463208 GAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTG 463149 Query 79242 GGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAA 79301 ||| || | ||| | ||||| | ||||| | ||||| | | || Sbjct 463148 AGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAA 463089 Query 79302 AGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTC 79361 | || || ||| || | ||||| ||||| |||| |||||||| || ||| || Sbjct 463088 TTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTC 463029 Query 79362 CTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTC 79421 ||| |||| || || |||||| || || |||||||| || || ||| ||||| Sbjct 463028 GCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTC 462969 Query 79422 GCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTC 79481 || || | |||||| | || || ||| || || || || || || | || ||| Sbjct 462968 ACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTC 462909 Query 79482 GGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTT 79541 ||||||||| || || || ||||||||||| | ||| |||||| || ||||||| Sbjct 462908 GGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTC 462849 Query 79542 GACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCC 79601 ||||| || || ||||||||||| || || |||||||| ||||| |||| || || Sbjct 462848 AACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACC 462789 Query 79602 GTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCG--AGCAGTGGATTCCGATG 79659 || || ||| ||| | || | || || | |||| | || | || || Sbjct 462788 ATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGA--TTCGGTGGGCGTTCAAGCCAATA 462731 Query 79660 CCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATC 79719 || || | | |||||| || || || |||||| || |||||||| || || || Sbjct 462730 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATG 462671 Query 79720 GAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCG 79779 ||| ||||||||| | || |||||||| || | ||| || | ||||||||| Sbjct 462670 CTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCG 462611 Query 79780 TTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTT--TTGGCTCATCAGATCGTACGTCT 79837 ||||| | || || | || || ||||||||||| ||| ||| || | ||| |||| Sbjct 462610 TTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTG--ACATGAGGTTGTATGTCT 462553 Query 79838 CCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888 || ||| ||| | ||||| || ||| || || ||||| ||||||| Sbjct 462552 CCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGA 462502 Score = 334 bits (370), Expect = 8e-87 Identities = 914/1378 (66%), Gaps = 34/1378 (2%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||||||||| || || ||| || ||||| | ||| ||| ||||||||| Sbjct 462502 TCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGTCTTGGAGACATACA 462561 Query 19176 ACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACG 19234 |||| ||| | || ||||||||||| || || | || || | |||||||||||||| Sbjct 462562 ACCTCATGT-CAAGCAAGTTCTTCACTCATGCAAGCCCCACTTTATTCAACGCCGGTACT 462620 Query 19235 AACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGC 19294 | || ||| | || || ||||| || | ||||||||| ||||||||||| || Sbjct 462621 CCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAGGACAGCATTGATGGT 462680 Query 19295 ATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATC 19354 |||||||| || |||||| || || || |||||| | | || ||||| || | Sbjct 462681 ATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCTTG 462740 Query 19355 CACTGCT--CGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG 19412 || | ||||| ||| | | ||| | ||| || || || || || Sbjct 462741 AACGCCCACCGAAT--CCGTGCCACTGGCTCTTACATCGCCGGTACCAATGGTACTTCCA 462798 Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 |||||||||| || ||||| || || ||||||||||| || | ||||| ||||||| | Sbjct 462799 ACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTTGACCAGGGTG 462858 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 | ||| || || | |||||||||||||| || ||||||||||| |||||| | | Sbjct 462859 GTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAACCATGGCACGCCGACGTCTTCG 462918 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 | ||||| || || || ||| || ||| | |||||| | ||| ||| ||||| ||| Sbjct 462919 AGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGCGCTCGTGACCTGTTCT 462978 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652 || | ||||| || || || |||||| || || |||| ||| |||||| | Sbjct 462979 TAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGAAACGGCGAATGGACTC 463038 Query 19653 TGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGT 19712 | |||||||| |||||||||||||||| | ||| |||||| || | || | | Sbjct 463039 TCATGTGCCCTAACGAATGCCCTGGCCTTGCTGACTGCTACGGTGACGAATTTGAGGCTC 463098 Query 19713 TGTACCGGACTTACG-TAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTC 19771 ||||| | |||| || || || || ||| || ||| | | | | Sbjct 463099 TGTACGAAAAGTACGAGAGAGAGGGTAAGGGTC-GCAAGTCTATCAAGGCTCAGAAACTT 463157 Query 19772 TGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGA- 19830 ||| || | | || | |||| |||||||| | || | |||| ||||||||| Sbjct 463158 TGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACCCTTTCATGCTCTACAAGGAT 463217 Query 19831 CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTCGTCCAACCTG 19888 | | || | || |||| || || |||||| | || | ||| ||| ||||||||| Sbjct 463218 CACTGCAATCG-CAAGAGTAACCAAAAGAACCTTGGTACCATCCGAAG--CTCCAACCTG 463274 Query 19889 TGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCC 19948 || ||||| ||||| || | | || || ||| || || || || || || ||| Sbjct 463275 TGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTGTTTGCAACCTTGCCTCC 463334 Query 19949 CTGTGCCTGCCGACTTTCGTCA------AGGCCTCCTCCTTCGACTTTGCCAAATTGTAC 20002 ||| ||||| |||| ||| | | | | || |||||| || || || Sbjct 463335 TTGTCTCTGCCCTCTTTTATCAACTATGAAGATGCTTGCTACGACTTCAAGAAGCTGCAC 463394 Query 20003 GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCG 20062 ||||| || | || || || ||| |||| ||||||| ||| ||||| Sbjct 463395 GAGGTCACTCAAGTTGTTGTCCGCAATTTGAACAAGATCATCGACGTCAACCACTACCCT 463454 Query 20063 ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGC 20122 | | | ||| || || || ||||| ||||| || || | | || || || || Sbjct 463455 GTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCATTGGTCTTGGTGTGCAAGGT 463514 Query 20123 CTGGCCGACG-TTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCT 20181 || || || | |||| || ||| || | | || || ||| |||| || ||||| Sbjct 463515 CTCGCTGATGCCTTTCTTG-CCCTCCGCATGCCCTTTGAGTCTCCTGAGGCTCGTGAGCT 463573 Query 20182 CAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC-TCCTGGAATCGTGCGAACTCG 20240 |||||| ||||||||| || | |||||||| |||| | || |||| |||||| Sbjct 463574 GAACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTACTACGTCTGTGC-AACTCG 463632 Query 20241 CCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCC 20300 |||| ||||| || || ||| || |||||||| || || || || |||||||| |||| Sbjct 463633 CCAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCTCCCCTGCCTCTGAGGGTATTCTCC 463692 Query 20301 AGCCGGACATGTGGGGCGTCA------CTGA-GAATGAGTTTTGGAGCGCCCTCAAGGTT 20353 || ||||||||| |||| |||| || | | ||| | ||||| | Sbjct 463693 AGTTCGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAAC-CCCTCCGAGAG 463751 Query 20354 GAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCG 20413 || ||||||| ||||| | |||||| ||||||| || || ||||| |||||| Sbjct 463752 GATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGCCTACCGCCAGT 463811 Query 20414 ACCGCCCAGATCATGGGGAACAACG-AGGCTTTCGAGCCGTACACGACCAACATCTAC 20470 ||| | ||||| | || ||||||| | ||||| ||||| ||||| ||||||||||| Sbjct 463812 ACCTCGCAGATTCTTGGCAACAACGAATGCTTT-GAGCCTTACACCTCCAACATCTAC 463868 >seq291 Length=442874 Score = 105 bits (116), Expect = 7e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 || || || ||||| | |||||||| ||| || || ||||||||| || | || Sbjct 1049 TTCGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT 990 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | | || ||||||||||| ||||||||||||||||| || ||||| || || |||||| Sbjct 989 GCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAG 930 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCA 60118 || ||||| || |||||||| || || Sbjct 929 CTCATTTCTCGTGACGAGGGTCTTCA 904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548522722462320