Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717905.1_202016-08-31]
303 sequences; 36,666,367 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq38 354 9e-93
seq291 105 7e-18
>seq38
Length=1092239
Score = 354 bits (392), Expect = 9e-93
Identities = 1130/1731 (65%), Gaps = 45/1731 (3%)
Strand=Plus/Minus
Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247
|||| || | ||||||||||| ||||||||||| |||||| || | |||||| |
Sbjct 464217 GTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGC 464158
Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307
| | | |||| ||| | |||| || |||| |||||||| ||||| ||||| || |
Sbjct 464157 TGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAA 464098
Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367
|| | ||||| ||||| || ||||| | | ||| || | ||||||||| | |
Sbjct 464097 TGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAG 464038
Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGC 78425
|| ||| | ||||| | ||| | |||||| | | ||| | | | ||||
Sbjct 464037 TCTTGTACAGAGCCTTGATCTCGGCAGGGATGTT--GGGGATGTTCTGGATAGAACCGT- 463981
Query 78426 TCGCA-CAAT--TTCA-TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCC 78481
| || |||| | | ||||| || | | ||| || || | |||||||
Sbjct 463980 TATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCT 463921
Query 78482 GGA----CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAG 78537
|| ||||| |||| | | ||||||||| || ||| ||||| |||||
Sbjct 463920 TGAGAAGCCAGG----GGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAG 463865
Query 78538 ATGTTGGTCGTGTACGGCTCGAAAGCCT-CGTTGTTCCCCATGATCTGGGCGGTCGAGGC 78596
||||||| ||||| ||||| ||||| | ||||||| || | ||||| | ||| |||
Sbjct 463864 ATGTTGGAGGTGTAAGGCTC-AAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGC 463806
Query 78597 GGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT 78656
||| ||||| || || || || ||| || || | ||| || ||||||| || |
Sbjct 463805 GGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCG 463746
Query 78657 TAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGAT 78710
||| | |||||||| ||| | | || ||||||||| || || ||
Sbjct 463745 GAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATTCCACATGTCGAACTGGAGAAT 463686
Query 78711 ACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTC 78770
|||||| || || || || |||||||| || ||| | || ||||||||||||||||
Sbjct 463685 ACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTT- 463627
Query 78771 GCAT-GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGC 78829
||| ||| ||||| |||||||| | | ||||||||| |||||| ||||| |
Sbjct 463626 GCACAGACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCAC 463567
Query 78830 GCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGA 78889
| |||| | || || | | || ||| | ||| |||| || || || || |
Sbjct 463566 GAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCA 463507
Query 78890 CGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAA 78949
| || | | | || |||||||| ||||||||||| || || ||| | | | |||||
Sbjct 463506 CACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGT 463447
Query 78950 AGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATT 79009
||| ||||||| ||||| || || || || |||| ||||||| || |
Sbjct 463446 GGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCT 463387
Query 79010 TGGCGAAATCAAA---ATGAT-TTCCT--TTGATGAAAGTCGGTAGGCACAGCGATGCCA 79063
| ||| || | | || ||| | ||||| |||| || || ||| || || |
Sbjct 463386 TCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGACAAGGAGGCAA 463327
Query 79064 GGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAG 79123
||||||| || || ||| || ||| | || ||||| || ||||||| || |
Sbjct 463326 GGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGG 463267
Query 79124 ACGACTT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181
| ||| |||||| || | |||||| ||||| ||||| || ||| ||||||||
Sbjct 463266 AG--CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTA 463209
Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241
| |||| | || | |||||||| ||| || |||| | ||| ||| | | | |
Sbjct 463208 GAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTG 463149
Query 79242 GGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAA 79301
||| || | ||| | ||||| | ||||| | ||||| | | ||
Sbjct 463148 AGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAA 463089
Query 79302 AGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTC 79361
| || || ||| || | ||||| ||||| |||| |||||||| || ||| ||
Sbjct 463088 TTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTC 463029
Query 79362 CTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTC 79421
||| |||| || || |||||| || || |||||||| || || ||| |||||
Sbjct 463028 GCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTC 462969
Query 79422 GCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTC 79481
|| || | |||||| | || || ||| || || || || || || | || |||
Sbjct 462968 ACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTC 462909
Query 79482 GGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTT 79541
||||||||| || || || ||||||||||| | ||| |||||| || |||||||
Sbjct 462908 GGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTC 462849
Query 79542 GACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCC 79601
||||| || || ||||||||||| || || |||||||| ||||| |||| || ||
Sbjct 462848 AACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACC 462789
Query 79602 GTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCG--AGCAGTGGATTCCGATG 79659
|| || ||| ||| | || | || || | |||| | || | || ||
Sbjct 462788 ATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGA--TTCGGTGGGCGTTCAAGCCAATA 462731
Query 79660 CCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATC 79719
|| || | | |||||| || || || |||||| || |||||||| || || ||
Sbjct 462730 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATG 462671
Query 79720 GAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCG 79779
||| ||||||||| | || |||||||| || | ||| || | |||||||||
Sbjct 462670 CTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCG 462611
Query 79780 TTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTT--TTGGCTCATCAGATCGTACGTCT 79837
||||| | || || | || || ||||||||||| ||| ||| || | ||| ||||
Sbjct 462610 TTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTG--ACATGAGGTTGTATGTCT 462553
Query 79838 CCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888
|| ||| ||| | ||||| || ||| || || ||||| |||||||
Sbjct 462552 CCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGA 462502
Score = 334 bits (370), Expect = 8e-87
Identities = 914/1378 (66%), Gaps = 34/1378 (2%)
Strand=Plus/Plus
Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175
||||||||||||| || || ||| || ||||| | ||| ||| |||||||||
Sbjct 462502 TCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGTCTTGGAGACATACA 462561
Query 19176 ACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACG 19234
|||| ||| | || ||||||||||| || || | || || | ||||||||||||||
Sbjct 462562 ACCTCATGT-CAAGCAAGTTCTTCACTCATGCAAGCCCCACTTTATTCAACGCCGGTACT 462620
Query 19235 AACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGC 19294
| || ||| | || || ||||| || | ||||||||| ||||||||||| ||
Sbjct 462621 CCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAGGACAGCATTGATGGT 462680
Query 19295 ATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATC 19354
|||||||| || |||||| || || || |||||| | | || ||||| || |
Sbjct 462681 ATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCTTG 462740
Query 19355 CACTGCT--CGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG 19412
|| | ||||| ||| | | ||| | ||| || || || || ||
Sbjct 462741 AACGCCCACCGAAT--CCGTGCCACTGGCTCTTACATCGCCGGTACCAATGGTACTTCCA 462798
Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472
|||||||||| || ||||| || || ||||||||||| || | ||||| ||||||| |
Sbjct 462799 ACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTTGACCAGGGTG 462858
Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532
| ||| || || | |||||||||||||| || ||||||||||| |||||| | |
Sbjct 462859 GTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAACCATGGCACGCCGACGTCTTCG 462918
Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592
| ||||| || || || ||| || ||| | |||||| | ||| ||| ||||| |||
Sbjct 462919 AGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGCGCTCGTGACCTGTTCT 462978
Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652
|| | ||||| || || || |||||| || || |||| ||| |||||| |
Sbjct 462979 TAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGAAACGGCGAATGGACTC 463038
Query 19653 TGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGT 19712
| |||||||| |||||||||||||||| | ||| |||||| || | || | |
Sbjct 463039 TCATGTGCCCTAACGAATGCCCTGGCCTTGCTGACTGCTACGGTGACGAATTTGAGGCTC 463098
Query 19713 TGTACCGGACTTACG-TAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTC 19771
||||| | |||| || || || || ||| || ||| | | | |
Sbjct 463099 TGTACGAAAAGTACGAGAGAGAGGGTAAGGGTC-GCAAGTCTATCAAGGCTCAGAAACTT 463157
Query 19772 TGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGA- 19830
||| || | | || | |||| |||||||| | || | |||| |||||||||
Sbjct 463158 TGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACCCTTTCATGCTCTACAAGGAT 463217
Query 19831 CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTCGTCCAACCTG 19888
| | || | || |||| || || |||||| | || | ||| ||| |||||||||
Sbjct 463218 CACTGCAATCG-CAAGAGTAACCAAAAGAACCTTGGTACCATCCGAAG--CTCCAACCTG 463274
Query 19889 TGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCC 19948
|| ||||| ||||| || | | || || ||| || || || || || || |||
Sbjct 463275 TGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTGTTTGCAACCTTGCCTCC 463334
Query 19949 CTGTGCCTGCCGACTTTCGTCA------AGGCCTCCTCCTTCGACTTTGCCAAATTGTAC 20002
||| ||||| |||| ||| | | | | || |||||| || || ||
Sbjct 463335 TTGTCTCTGCCCTCTTTTATCAACTATGAAGATGCTTGCTACGACTTCAAGAAGCTGCAC 463394
Query 20003 GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCG 20062
||||| || | || || || ||| |||| ||||||| ||| |||||
Sbjct 463395 GAGGTCACTCAAGTTGTTGTCCGCAATTTGAACAAGATCATCGACGTCAACCACTACCCT 463454
Query 20063 ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGC 20122
| | | ||| || || || ||||| ||||| || || | | || || || ||
Sbjct 463455 GTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCATTGGTCTTGGTGTGCAAGGT 463514
Query 20123 CTGGCCGACG-TTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCT 20181
|| || || | |||| || ||| || | | || || ||| |||| || |||||
Sbjct 463515 CTCGCTGATGCCTTTCTTG-CCCTCCGCATGCCCTTTGAGTCTCCTGAGGCTCGTGAGCT 463573
Query 20182 CAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC-TCCTGGAATCGTGCGAACTCG 20240
|||||| ||||||||| || | |||||||| |||| | || |||| ||||||
Sbjct 463574 GAACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTACTACGTCTGTGC-AACTCG 463632
Query 20241 CCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCC 20300
|||| ||||| || || ||| || |||||||| || || || || |||||||| ||||
Sbjct 463633 CCAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCTCCCCTGCCTCTGAGGGTATTCTCC 463692
Query 20301 AGCCGGACATGTGGGGCGTCA------CTGA-GAATGAGTTTTGGAGCGCCCTCAAGGTT 20353
|| ||||||||| |||| |||| || | | ||| | ||||| |
Sbjct 463693 AGTTCGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAAC-CCCTCCGAGAG 463751
Query 20354 GAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCG 20413
|| ||||||| ||||| | |||||| ||||||| || || ||||| ||||||
Sbjct 463752 GATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGCCTACCGCCAGT 463811
Query 20414 ACCGCCCAGATCATGGGGAACAACG-AGGCTTTCGAGCCGTACACGACCAACATCTAC 20470
||| | ||||| | || ||||||| | ||||| ||||| ||||| |||||||||||
Sbjct 463812 ACCTCGCAGATTCTTGGCAACAACGAATGCTTT-GAGCCTTACACCTCCAACATCTAC 463868
>seq291
Length=442874
Score = 105 bits (116), Expect = 7e-18
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032
|| || || ||||| | |||||||| ||| || || ||||||||| || | ||
Sbjct 1049 TTCGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT 990
Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092
| | || ||||||||||| ||||||||||||||||| || ||||| || || ||||||
Sbjct 989 GCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAG 930
Query 60093 CTGATTTCCCGGGACGAGGGCCTCCA 60118
|| ||||| || |||||||| || ||
Sbjct 929 CTCATTTCTCGTGACGAGGGTCTTCA 904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548522722462320
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