Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717905.1_202016-08-31]
303 sequences; 36,666,367 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq187 120 3e-22
>seq187
Length=1074518
Score = 120 bits (132), Expect = 3e-22
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045
|||||||||| || || || || ||||||||||| ||||||| || || || || | |
Sbjct 440578 CCATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACTATTACCCTCGAGGTTGAGTCAT 440519
Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105
| || | || || | ||||| || ||||| ||||| || ||||| || || ||||
Sbjct 440518 CTGATACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGATC 440459
Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165
| ||||| || || | ||||||||| || | || || | ||| | ||||||||||
Sbjct 440458 AGCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGATTACA 440399
Query 27166 ACATTCAAAAGGAGTCGAC 27184
|||| || |||||||||||
Sbjct 440398 ACATCCAGAAGGAGTCGAC 440380
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069
||||||||||| | || || ||||| || || | |||||| | || || | |||||
Sbjct 440044 TGACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGACACTATCGACAACGTCAAGT 439985
Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129
|| || || ||||| || || || || || ||||| ||||| || || | ||||||||
Sbjct 439984 CCAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATTTTCGCCGGCA 439925
Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189
| || | || ||| || ||| | ||||| |||||||| || ||||| || ||| | |
Sbjct 439924 AGCAGCTCGAGGACGGTCGAACCCTCTCCGACTACAACATCCAGAAGGAATCAACCCTTC 439865
Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGG 27214
| |||| | ||| | || |||||
Sbjct 439864 ACCTGGTCCTTCGTCTTCGTGGTGG 439840
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || |||||| | || || || || || || | |||
Sbjct 440348 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 440289
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || || || ||||| || ||||| || || |||||
Sbjct 440288 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAG 440229
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | ||||||||| || | || || | ||| | ||||| ||||||
Sbjct 440228 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 440169
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || |||||||||||
Sbjct 440168 ATCCAGAAGGAGTCGAC 440152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434916752746560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |