Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717905.1_202016-08-31]
303 sequences; 36,666,367 total letters
Query= NC_031242.1
Length=174307
Score E
Sequences producing significant alignments: (Bits) Value
seq35 89.7 6e-13
>seq35
Length=143290
Score = 89.7 bits (98), Expect = 6e-13
Identities = 152/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 161555 TACATTCTTGACGCAGCTGAGGAAGCGGGTGTGGACATCAACTACTCGTGTCGTGCAGGC 161614
|| || || || | ||||||||| ||| | || || || |||| ||||| ||
Sbjct 65923 TATATCCTGGATGAAGCTGAGGAGTAGGGCATTGAAATACCATATTCGTTCCGTGCCGGG 65982
Query 161615 GCTTGTTCGTCGTGCGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 161674
|||||||| | ||||| || | | | ||||| || | ||| || ||| ||||||||||
Sbjct 65983 GCTTGTTCCGCCTGCGCCGGGATATTGGTCTCAGGGAGCGTCGATCAAGGCGACCAGTCT 66042
Query 161675 TTCCTGGACGATGACCAAATCGATTCTG--GTTTCATTCTGACTTGTGTTTCTTATCCCA 161732
||||||| || |||| || | | | || | |||||| ||||| | |||||||
Sbjct 66043 CTCCTGGATGACAACCAGATTGGC-CGGAAGTAT-ATTCTGCTGTGTGTCGCCTATCCCA 66100
Query 161733 CGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGA 161769
||||||| || || | |||||| | || ||||| ||
Sbjct 66101 CGAGCGACTGCGTCAGTGAGACCAACAAGGAAGACGA 66137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557652287883960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |