Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31] 520 sequences; 36,350,275 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq118 127 4e-24 seq280 84.2 5e-11 >seq118 Length=243722 Score = 127 bits (140), Expect = 4e-24 Identities = 160/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473 ||||||| || ||| ||| | || ||| ||| | ||||||||| | | || ||| Sbjct 111682 AGGAGTTTCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGA 111623 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 ||||||||||||||||| || || || | | ||||| || || ||||||| |||| Sbjct 111622 AGCAGTACATCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCGGCAACGAGAAGGTGT 111563 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 |||| || | ||||| || | || |||||| ||| || ||| || |||||||||| Sbjct 111562 ACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACT 111503 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||||||| ||||| || |||||| |||| | | ||||| Sbjct 111502 TCTTCGAGAAGCGCGTTGCTGACTACCAGAAGGCCGGTGT 111463 >seq280 Length=213829 Score = 84.2 bits (92), Expect = 5e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916 |||||| || || | ||| |||| || |||||||| ||||| || || || | || Sbjct 149456 GGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGACTTTCCGGAACC 149397 Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAG 319976 ||| || ||||| |||||||| || | || || || || || | || | ||| || Sbjct 149396 GTTGGGACCACAAAGACCGTAACGCTGACCACGCTTGAGACGGAGGTGAGTCTGGTTGAG 149337 Query 319977 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 |||||| || |||| || || ||||| ||| ||| | || ||||||||||| Sbjct 149336 AAGAATCTTGGCACCGTAGGCAAGAGAGAATGTACAGTTGCAAAGATCCTCACC 149283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057816952247600