Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31]
520 sequences; 36,350,275 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq393 257 1e-63
seq118 140 3e-28
seq170 91.5 1e-13
>seq393
Length=304890
Score = 257 bits (284), Expect = 1e-63
Identities = 621/936 (66%), Gaps = 8/936 (1%)
Strand=Plus/Minus
Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086
|||||||| ||||| || || ||||| || || ||| || | || || || ||
Sbjct 8430 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCAC 8371
Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146
|| ||| | || || || | || | ||||| || || |||||||| ||||
Sbjct 8370 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCC 8311
Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206
|||||||||||| | || | || ||||| ||| | ||| | || || ||| |
Sbjct 8310 TTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGT 8251
Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGC 23265
||||||| | | | | | || ||| || ||| ||||||||||| ||||| ||
Sbjct 8250 TTCTGAGCCTTGATA-GACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGC 8192
Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325
||||||||| ||||||| ||||| || ||||| || ||| | || ||||||||| |
Sbjct 8191 CTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGT 8132
Query 23326 CCACATTGAGTCATTT---TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382
||| | | | ||| || || || |||| |||||||| || ||||| ||||| |
Sbjct 8131 CCA---TTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAA 8075
Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTC 23442
|||||| || || ||||| |||||||| || ||| |||||| | ||| | || ||
Sbjct 8074 GAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTC 8015
Query 23443 CAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCC 23502
|| ||||| || ||||| || || ||||| | ||| || || || |||| ||| || ||
Sbjct 8014 GAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACC 7955
Query 23503 GCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTT 23562
||||| || |||||||| || ||||||||| |||| | ||||| || |||| ||||||
Sbjct 7954 ACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTT 7895
Query 23563 GGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAA 23622
||| | || || || | || || | || || | ||| ||| ||
Sbjct 7894 GGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAA 7835
Query 23623 ACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCC 23682
|| || || || || || || ||||| || || || || || |||||||| ||
Sbjct 7834 GCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACC 7775
Query 23683 CTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGT 23742
|| ||||||||||| || | | || | ||| || || || | || | | || ||
Sbjct 7774 ATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGT 7715
Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTA 23802
| |||| ||| | || ||||| || || || ||| | | ||||| || |||||
Sbjct 7714 ACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTA 7655
Query 23803 CGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCAT 23862
|| || | | | ||||| || || || || || | ||||| ||||| |||||
Sbjct 7654 TGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGATCAT 7595
Query 23863 GTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922
| || || | ||| | | ||||| ||| | | || ||||| | || ||
Sbjct 7594 ATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCTGGACAAGGT 7535
Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATC 23958
| || |||||||||| ||||| ||||| |||||
Sbjct 7534 TCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGATC 7499
Score = 105 bits (116), Expect = 6e-18
Identities = 224/331 (68%), Gaps = 4/331 (1%)
Strand=Plus/Minus
Query 22241 TTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAA--TG 22298
|||| |||||| |||||| || || || || || || || ||||| | | ||| ||
Sbjct 9216 TTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCA-CAACCTG 9158
Query 22299 TACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATT 22358
| ||| || || ||||| || ||||||||||| | ||||||| || ||
Sbjct 9157 T-CGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGG 9099
Query 22359 CGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACA 22418
||| |||||| || ||||||| ||||| || || || | |||| ||| |
Sbjct 9098 GGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAA 9039
Query 22419 AACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACA 22478
||| ||| || | ||| |||| || |||| || || || |||||||| | |
Sbjct 9038 GACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAA 8979
Query 22479 AGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTA 22538
||| ||||||||||| |||||||| ||| | || || || |||| ||||| || || |
Sbjct 8978 GGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAA 8919
Query 22539 TCTGAGCGGTCGAAGCGGTCGGCATCGGCGC 22569
|||| | ||| ||||| ||||| || ||
Sbjct 8918 TCTGCGAGGTACTGGCGGTAGGCATAGGAGC 8888
>seq118
Length=243722
Score = 140 bits (154), Expect = 3e-28
Identities = 454/701 (65%), Gaps = 37/701 (5%)
Strand=Plus/Minus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| |||||||| || || || ||||| | || || | || ||
Sbjct 112319 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 112260
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAAT-CTGA-GAGAAAT--TTTATTAA 57685
|| |||||||| ||| ||| | || | || | | || ||| ||| || ||
Sbjct 112259 TCCAAGGATCTCCACGACTGGAACAACCG-ATTGACTTCAGACGAGCAATACTTCATCTC 112201
Query 57686 ACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAG 57745
||| | | || || ||||| || ||||| || || || || |||||| | || || |
Sbjct 112200 CCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCG 112141
Query 57746 ATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805
||| || || || | | ||||| ||||||| || || || || | ||
Sbjct 112140 ATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGAT 112081
Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865
|| ||| | || || |||| || || || ||||||||||| ||| | |||||| |
Sbjct 112080 GGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTGC 112021
Query 57866 CGAGAAACGTAGA---CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922
| || |||| | || |||||||| | || || || || ||| ||||||||
Sbjct 112020 CCAG---CGTACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGGC 111964
Query 57923 AGAGTGGTCAATCAAATGGAT----AAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAA 57978
|| ||| | ||| |||||| | ||| | | || ||||| || | ||
Sbjct 111963 GGATTGGGCCATCCGATGGATCCAGGATAAG----AACTCTACCTTCGCTCAGCGTCTTG 111908
Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038
| || || || ||||| || ||||| ||||| || |||||| | || || |||
Sbjct 111907 TTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGC 111848
Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098
| ||||| || ||||| ||||| || |||| ||| |||||| | || || || || |
Sbjct 111847 TCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATG 111788
Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT---------TGTCAATA 58149
||||||| || || || ||||| || || | |||||||| | || || |
Sbjct 111787 AGGGTCTTCACACCGACTTTGCCTGTCTCCTCCACTCTCACCTCAAGGGACGTGCCAGCA 111728
Query 58150 AACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGT 58209
||| || | ||| ||||||||||||||| || || | || || | ||||
Sbjct 111727 AACAGATG---------ATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGAGT 111677
Query 58210 TTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAAC 58250
|| | || || || || || ||| ||||||| ||||||
Sbjct 111676 TTCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAAC 111636
>seq170
Length=295105
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| |||||||| ||||| || || || || ||||||||| | || || || | ||
Sbjct 93863 CATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTC 93922
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| | || | ||||| | || ||||||||| || | || || |||||
Sbjct 93923 CGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 93982
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || || ||||| || ||| | || || || ||||||| || ||
Sbjct 93983 GCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAA 94042
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || || || ||||| |||| ||
Sbjct 94043 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCT 94075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445763502518400
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