Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31]
520 sequences; 36,350,275 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq194 104 4e-18
seq23 104 4e-18
>seq194
Length=38674
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||||| | ||||| |||||||| || ||||| ||||| || ||
Sbjct 36508 GCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACAAAGCCCGCCAT 36450
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 36449 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 36409
>seq23
Length=103360
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| | | ||||| |||||||| || ||||||||||| |||||
Sbjct 40971 GCCAAGCGTCACCGAAAGATTT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 40913
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 40912 TCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 40872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074724560360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |