Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31] 520 sequences; 36,350,275 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq393 161 1e-34 >seq393 Length=304890 Score = 161 bits (178), Expect = 1e-34 Identities = 1076/1708 (63%), Gaps = 67/1708 (4%) Strand=Plus/Minus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 9318 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 9259 Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707 || || | |||| | || || | |||| | ||| | | || || ||| Sbjct 9258 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 9199 Query 113708 TCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 113764 || |||||| ||||| || || ||||| | |||| ||| || || ||| Sbjct 9198 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 9142 Query 113765 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAG 113824 |||||||| |||| || ||| || || | ||||| | ||| || ||||| || Sbjct 9141 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 9082 Query 113825 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 113881 || | | || ||| || | | ||||||| | | ||||| ||||| || | Sbjct 9081 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 9025 Query 113882 AGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 113938 ||||||| |||| || |||||||| ||||| || || ||| || | Sbjct 9024 AGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGT 8968 Query 113939 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTG 113998 | ||||| |||| ||||| ||||||||||| || ||||| || | || || | ||| Sbjct 8967 TGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTA 8908 Query 113999 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 114058 ||| || ||||| || || | ||| || ||||| |||| ||| | | | | Sbjct 8907 CTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCC 8848 Query 114059 TCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 114116 || ||||| |||||||| | | | || | || | | |||||| || |||| Sbjct 8847 TCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAACT 8790 Query 114117 GGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCG 114176 |||| ||||| | ||||| || || |||| || || ||| || || || ||| | Sbjct 8789 GGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGG 8730 Query 114177 CCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235 | | || | || || ||||| ||||| || || ||||| || || | ||| Sbjct 8729 CGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 8671 Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295 | | ||||| || ||||| | | ||| || ||| |||| |||||| Sbjct 8670 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGA 8611 Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG 114355 ||||| ||||| || ||||| || || || | ||| || || ||||| | || Sbjct 8610 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACA 8551 Query 114356 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 114415 || || || ||||| | | | || | ||| | ||||| | |||| || Sbjct 8550 GGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCG 8491 Query 114416 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCG 114472 || ||||| | | | || | || || ||||||| ||| | | || || | Sbjct 8490 TGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGAC 8434 Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 | || || || || || |||| | |||||| | ||| || || || || || Sbjct 8433 AAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTG 8374 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTACACG 114590 |||| || || || ||||| || | ||||||||| || ||| ||| | || || Sbjct 8373 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTGCAGT 8316 Query 114591 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 114650 ||||||||| |||||| | || | || ||||| || |||| || ||||| || | || Sbjct 8315 GATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACC 8256 Query 114651 AGACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTT 114703 | | | | | | || | | | ||| || |||| |||| |||||||||| Sbjct 8255 AAAGTTTCTGAGCCTTGA----TAGACTTG---CGACCCTTACCCTCTCTCTCGTACTTT 8203 Query 114704 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT-GG 114762 ||| || || ||||| || ||||| | || | || || || || || | || Sbjct 8202 TCGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGG 8144 Query 114763 GCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCA 114822 ||| | ||||| ||||| || ||| |||||||||||||| || || |||||||| Sbjct 8143 GCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCA 8084 Query 114823 GAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 114882 |||||| |||| || || ||| ||| | || || | || ||||| || | || Sbjct 8083 AAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATC 8024 Query 114883 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 114942 | || || | || || |||||||| ||||| ||||| | |||| | || | | Sbjct 8023 AAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACC---AGG 7967 Query 114943 ACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGG 114996 || |||| |||||| || || | || ||| || || || || ||||| || Sbjct 7966 TCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGG 7907 Query 114997 AATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACA 115054 || |||||| | || ||||| || || ||| || ||| | | |||| | || Sbjct 7906 AACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGATT 7849 Query 115055 TCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 115114 ||| || || |||||||| || ||| ||| || || || || | |||| Sbjct 7848 CGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGG 7789 Query 115115 CTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATT 115174 | ||||||| || || || ||| |||| | | | ||||||||| || | Sbjct 7788 GTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGC 7729 Query 115175 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG- 115233 || ||| ||| ||||| |||||||| | || || | || || ||| | | |||| Sbjct 7728 TGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGC 7671 Query 115234 -GGACATCTTATCGTAGGTCTCCAAGAC 115260 ||||| | ||| ||||||||||| Sbjct 7670 TTGACATGAGGTTGTATGTCTCCAAGAC 7643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349717201600