Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31]
520 sequences; 36,350,275 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq170 122 9e-23
seq118 84.2 2e-11
>seq170
Length=295105
Score = 122 bits (134), Expect = 9e-23
Identities = 144/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||||||| || || |||||||| || ||||| | |
Sbjct 94057 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCA 93998
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||| |||||||| || ||||| || ||||| ||| || || |
Sbjct 93997 AAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACG 93938
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||||| ||||||||||| | || | ||| || || || || || ||
Sbjct 93937 TTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTG 93878
Query 138601 ACAAAAATCTGCATG 138615
|| ||||||||||||
Sbjct 93877 ACGAAAATCTGCATG 93863
>seq118
Length=243722
Score = 84.2 bits (92), Expect = 2e-11
Identities = 257/392 (66%), Gaps = 19/392 (5%)
Strand=Plus/Minus
Query 52445 CTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAA 52504
|||||| ||||||| | | || | | ||| | ||||| || |||| || ||
Sbjct 111867 CTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAA 111808
Query 52505 CGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTG---CCTCTACT---A 52558
|||| | || || || || || || || ||||| |||||||| || |||| ||| |
Sbjct 111807 CGAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGTCTCCTCCACTCTCA 111748
Query 52559 CAAGACGCG-CGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGG 52617
| | | | |||| | | ||| ||| ||||| | ||| ||| || |
Sbjct 111747 CCTCAAGGGACGTGCCAGCAAACA--GAT--------GATCCAGGACATTATCACCGATG 111698
Query 52618 CGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGA 52677
| || |||| || |||||||| |||| | || || || | ||||| |||||||
Sbjct 111697 CCGTTTCTATTGAGCAGGAGTTTCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGA 111638
Query 52678 ACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG 52737
|| | | |||| |||||||||| || || || |||||||| | || ||||
Sbjct 111637 ACTCCAACCTCATGAAGCAGTACATCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCG 111578
Query 52738 GGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTT 52796
| || | | ||| | ||| | ||| || || || || ||| | ||||| || |||
Sbjct 111577 G-CAACGAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTT 111519
Query 52797 GAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828
| |||||||||||||| ||||||||||| ||
Sbjct 111518 GGCGGCAAGACCAACTTCTTCGAGAAGCGCGT 111487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496259174294400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |