Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31]
520 sequences; 36,350,275 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq393 138 1e-27
>seq393
Length=304890
Score = 138 bits (152), Expect = 1e-27
Identities = 1075/1711 (63%), Gaps = 71/1711 (4%)
Strand=Plus/Minus
Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608
|||| || |||||||||||||| || |||||||| || |||||||| || | |||
Sbjct 9318 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 9259
Query 115609 ATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 115668
|| || | |||| | || || | |||| | ||| | | || || |||
Sbjct 9258 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 9199
Query 115669 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 115725
|| |||||| || || || || ||||| | |||| ||| || || |||
Sbjct 9198 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 9142
Query 115726 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAG 115785
|||||||| |||| || ||| || || | ||||| | ||| || ||||||||
Sbjct 9141 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 9082
Query 115786 CC---ACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTG 115842
|| | | || ||| || | | ||||||| | | ||||| ||||| || |
Sbjct 9081 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 9025
Query 115843 AGATCCTCCA----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCT 115898
||||||| | | ||| | |||||||| ||||| || || ||| || |
Sbjct 9024 AGATCCTTGAGAAGCCAGGGG----TTGACAACCTGGAACTCGCCAGCAAGGACTCGGCG 8969
Query 115899 CAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGT 115958
| |||||||||| ||||| ||||||||||| || ||||| || | || || | ||
Sbjct 8968 TTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGT 8909
Query 115959 GGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCG 116018
||| || ||||| || || | ||| || |||||||||| ||| | | |
Sbjct 8908 ACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATC 8849
Query 116019 TTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAAC 116076
|| ||||| |||||||| | | | || | || | | |||||| || |||
Sbjct 8848 CTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAAC 8791
Query 116077 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 116136
||||| ||||| | || || || || |||| || || || || || || |||
Sbjct 8790 TGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTG 8731
Query 116137 GCCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 116195
|| | || | || || ||||| ||||| || || ||||| || || | ||
Sbjct 8730 GCGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 8672
Query 116196 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAG 116255
|| | ||||| || ||||| | | ||| || ||| |||| |||||
Sbjct 8671 CAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAG 8612
Query 116256 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCAC 116315
|||||| ||||| || ||||| || || || | ||| || || ||||| | ||
Sbjct 8611 ACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGAC 8552
Query 116316 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 116375
|| || || ||||| | | | || | ||| | ||||| | |||| ||
Sbjct 8551 AGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTC 8492
Query 116376 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGC 116432
|| ||||| | | | || | || || ||||||| ||| | | || || |
Sbjct 8491 GTGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGA 8435
Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492
| || || || || || |||| | |||||| | ||| || || || || ||
Sbjct 8434 CAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGT 8375
Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTACAC 116550
|||| || || || ||||| || | ||||||||| || ||| ||| | || ||
Sbjct 8374 GCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTGCAG 8317
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
||||||||||||||| | || | || ||||| || |||| || ||||| || | |
Sbjct 8316 TGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTAC 8257
Query 116611 CATACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTT 116663
|| | | | | | || | | | ||| || |||| |||| |||||||||
Sbjct 8256 CAAAGTTTCTGAGCCTTGA----TAGACTTG---CGACCCTTACCCTCTCTCTCGTACTT 8204
Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCT- 116721
| ||| || |||||||| || ||||| ||| || | || || || || || |
Sbjct 8203 TTCGTACAGAGCCTCAAATTCGTCACCGT-AGCAGTCAGCAAGGCCAGG-GCATTCGTTA 8146
Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781
|| || | ||||| ||||| || ||| || ||||||||||| || || ||||||
Sbjct 8145 GGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATC 8086
Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 116841
|| || || |||| || || ||| ||| | || || | || ||||| || |
Sbjct 8085 CAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGA 8026
Query 116842 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC----- 116895
|| | || || | || || |||||||| ||||| ||||| | |||| | ||
Sbjct 8025 TCAAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGT 7966
Query 116896 CCCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATT 116955
| |||| |||| |||||| || || | || || ||| || || || |||||
Sbjct 7965 CGCTTG---TTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATG 7909
Query 116956 GGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGA 117013
|||| |||||| | || ||||| || || ||| || ||| | |||| | ||
Sbjct 7908 GGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGA 7851
Query 117014 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGA 117073
|||| || || |||||||| || ||| ||| || || || || | |||
Sbjct 7850 TTCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGA 7791
Query 117074 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 117133
| | ||||||| ||||| || ||| |||| | | | |||||||| || |
Sbjct 7790 GGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAA 7731
Query 117134 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT 117193
|| ||| ||| ||||| |||||||| | || || | || || ||| | | |||
Sbjct 7730 GCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTT 7673
Query 117194 G--GGACATCTTATCGTAGGTCTCCAAGACA 117222
| ||||| | ||| ||||||||||||
Sbjct 7672 GCTTGACATGAGGTTGTATGTCTCCAAGACA 7642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613503212203200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |