Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31]
520 sequences; 36,350,275 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq448 104 2e-16
seq431 91.5 1e-12
>seq448
Length=194427
Score = 104 bits (114), Expect = 2e-16
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914
||||| ||||||||| | |||| || |||||||| || ||||||||| | |||||||||
Sbjct 129714 GGTAAGGAAGGTCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 129773
Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974
|| || |||||| |||| |||| || | ||| |||| || ||||| |||| || ||
Sbjct 129774 ACCGTCATTACTGGTGATGCCAACCTTTCCCTCCATGAGGTCGGTGTGCCTCGTAGCATC 129833
Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006
|| || ||||||| | ||| | ||| ||
Sbjct 129834 GCCCGAACCCTTACTTATCCCGAGACTGTCAC 129865
>seq431
Length=164038
Score = 91.5 bits (100), Expect = 1e-12
Identities = 194/290 (67%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074
|| ||||| || || ||||||||||| ||||| | ||| | || | |||| | ||
Sbjct 21251 ACGAGACGGTTGTCGAAATCTTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACC 21310
Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134
| ||| | || || |||| | | |||| ||||| ||| |||||||| | |||
Sbjct 21311 TCGAAGATACCCTCCTCAATGGTAAGGAGAGAGACATCGAAGGTACCACCACCAAGATCG 21370
Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194
|| || || || || || || || || |||||||| || |||| || |||
Sbjct 21371 AAGATGAGGACGTTGCGCTCACCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCA 21430
Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254
|| || || || || || |||| | ||| || ||||| || || || ||||| ||
Sbjct 21431 GCGGTAGGCTCGTTGATGATTCGGAGAACGTTGAGACCGGCGATGAGACCCGCATCCTTG 21490
Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304
|| || || | || || ||||| || || ||||| || || | ||||||
Sbjct 21491 GTAGCCTGACGCTGAGAGTCGTTGAAGTAGGCAGGGACGGTGACAACGGC 21540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780796595887120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |