Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31] 520 sequences; 36,350,275 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq448 104 2e-16 seq431 91.5 1e-12 >seq448 Length=194427 Score = 104 bits (114), Expect = 2e-16 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||| ||||||||| | |||| || |||||||| || ||||||||| | ||||||||| Sbjct 129714 GGTAAGGAAGGTCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 129773 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || || |||||| |||| |||| || | ||| |||| || ||||| |||| || || Sbjct 129774 ACCGTCATTACTGGTGATGCCAACCTTTCCCTCCATGAGGTCGGTGTGCCTCGTAGCATC 129833 Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006 || || ||||||| | ||| | ||| || Sbjct 129834 GCCCGAACCCTTACTTATCCCGAGACTGTCAC 129865 >seq431 Length=164038 Score = 91.5 bits (100), Expect = 1e-12 Identities = 194/290 (67%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || ||||| || || ||||||||||| ||||| | ||| | || | |||| | || Sbjct 21251 ACGAGACGGTTGTCGAAATCTTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACC 21310 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||| | || || |||| | | |||| ||||| ||| |||||||| | ||| Sbjct 21311 TCGAAGATACCCTCCTCAATGGTAAGGAGAGAGACATCGAAGGTACCACCACCAAGATCG 21370 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || || || || || || || || |||||||| || |||| || ||| Sbjct 21371 AAGATGAGGACGTTGCGCTCACCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCA 21430 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 || || || || || || |||| | ||| || ||||| || || || ||||| || Sbjct 21431 GCGGTAGGCTCGTTGATGATTCGGAGAACGTTGAGACCGGCGATGAGACCCGCATCCTTG 21490 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 || || || | || || ||||| || || ||||| || || | |||||| Sbjct 21491 GTAGCCTGACGCTGAGAGTCGTTGAAGTAGGCAGGGACGGTGACAACGGC 21540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780796595887120