Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31] 520 sequences; 36,350,275 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq431 237 2e-57 seq102 98.7 1e-15 seq470 91.5 2e-13 >seq431 Length=164038 Score = 237 bits (262), Expect = 2e-57 Identities = 460/678 (68%), Gaps = 6/678 (1%) Strand=Plus/Plus Query 7408 CTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTC 7467 |||||| || ||||| ||||| | | |||||| || ||| | ||||||||||| Sbjct 21214 CTTATGCTTGCGTTTGAACTCATTAACGAAGTGGTTAACGAGACGGTTGTCGAAATCTTC 21273 Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527 |||||||||||| || || || || || | ||||| || |||||||| | |||||| | Sbjct 21274 ACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGT 21333 Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587 | | || ||||| || ||||||||||| || || || ||||| ||||| || | Sbjct 21334 AAGGAGAGAGACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGTTGCGCTCACC 21393 Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647 || ||||| || |||||||| || || || || || || || || || || || || Sbjct 21394 CTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGATTCG 21453 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 ||| ||| || || || || ||||||| || || || || || || || ||||| Sbjct 21454 GAGAACGTTGAGACCGGCGATGAGACCCGCATCCTTGGTAGCCTGACGCTGAGAGTCGTT 21513 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767 |||||||| ||||| || || || |||| |||| ||| |||||| || || || || Sbjct 21514 GAAGTAGGCAGGGACGGTGACAACGGCGTTGTTGACAGTCTCACCGAGGTAAGACTCAGC 21573 Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827 | || ||| ||||| || | ||| | || ||||| || | | || ||| | Sbjct 21574 AGTCTCACGCATCTTGGTGAGGATCATGGCGGAGATCTCCTCGGGGGTGAAGGTCTTCTT 21633 Query 7828 TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATA 7887 ||||| || || ||||| || || ||| || |||| | ||| | | | Sbjct 21634 CTCACCCTTGAACTCAACCTCGATGGCGGGCTT---GCCAGCCTTGTCGATGATTGTGAA 21690 Query 7888 CGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACG 7947 | | | ||||||||| | ||||||| || | ||||| | ||||| | || Sbjct 21691 GGGGAAGTGCTTCATATCGGCCTGGACCTCAGCATCGGCGAACTTGCGGCCGATCAATCG 21750 Query 7948 CTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCC 8007 ||| || || || || ||||| | |||||||||||| |||||||| || || || || Sbjct 21751 CTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACC 21810 Query 8008 GATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTG 8067 || ||||| || | || || || ||||| | || ||||| ||||| || || || Sbjct 21811 AATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTTCGGTTACCCTG 21867 Query 8068 GTCGTTCGCAATAATTTC 8085 |||||| || || || || Sbjct 21868 GTCGTTGGCGATGATATC 21885 Score = 132 bits (146), Expect = 6e-26 Identities = 526/829 (63%), Gaps = 19/829 (2%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || ||||| | || ||| || || || || || || Sbjct 19864 TCATCCTCCTCCTTGTACTTCTCAGCATCGTTGAGCATGCGCTCGATCTCCTCCTTGGAC 19923 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || ||||| | ||| || || | |||| || | Sbjct 19924 AGGCGGCCCTTGTCGTTGGTGATGACGATCTTGTTGGACTTGCCGGTACCCTTCTCGACG 19983 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || ||||| | |||||| | || | ||| || || | Sbjct 19984 GCGGAAACGTTCATGATACCGTTGGCATCGAGATCGAAGGTGACCTCAATCTGGGGAACA 20043 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | || ||||| || | || || | || | | |||| ||| | Sbjct 20044 CCACGGGGAGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTG 20103 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | || || ||||| || ||||| | || || |||| || || || Sbjct 20104 GTGCGCTGGCGCTCACCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTGTCGGAGAAG 20163 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | ||||| || || || | || || | | |||| Sbjct 20164 GTAGAGAAGACCTCGGACTTCTTGGTGGGAATGGTGGTGTTGCGGGGGATGAGCTTGGTC 20223 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| || |||| || ||||| ||||| | ||||| | ||| | | Sbjct 20224 ATCATACCACCAGCGGTCTCGATACCGAGAGAGAGAGGGGCAACGTCGAGGAGCAGAA-- 20281 Query 6989 TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACCG 7037 ||| | || || |||| |||| | | || || || ||||| | Sbjct 20282 TCTCG------TTGGTGGCCTTGCTAGAGGTGTCACCAGAGAGAATAGCAGCCTGGACAG 20335 Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097 || ||||| || || |||||||| ||||| || | || || | || || ||||| | Sbjct 20336 CGGCACCGTAGGCAACAGCCTCATCAGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGA 20395 Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157 | || || | | | | || | ||||| || || ||||||||||| | |||| Sbjct 20396 AGTAGTCGGTGATGAGCTTCTGGACACGGGGGATACGGGTAGATCCACCGACGAGGACGA 20455 Query 7158 TTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217 | || | || || || |||||||| | ||| ||| ||||| || | | Sbjct 20456 TCTCGTGGACGAGGGACTTGTCGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGGA 20515 Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277 | ||||| | ||| || || ||||| ||||| |||||||| ||||| || | Sbjct 20516 TGGTGGATCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAAGTGT 20575 Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337 ||||||||| || ||| | | || || || ||||||| || || || | ||||| | Sbjct 20576 AGAAATCAATACCCTCGAAGAGAGAGTCGATCTCAATGGAGGTCTGAGCGGAAGAAGAGA 20635 Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACG 7386 |||||||| ||||||||||| || ||||| | ||| ||||| ||||| Sbjct 20636 GAGTTCGCTTGGCGCGCTCACAAGCGGTTCGGAGACGTCGAAGAGCACG 20684 >seq102 Length=117963 Score = 98.7 bits (108), Expect = 1e-15 Identities = 170/244 (70%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | ||| || || || ||||| || || || ||||| || Sbjct 24203 ATCGAAATCCTCACCACCAAGGTGGGTGTCACCAGCGGTAGCGAGAACCTCGAAGATGCC 24262 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | || |||||||| || ||||||||||| || || | || | Sbjct 24263 ATCGTCAATGGAGAGCAGAGAAACATCGAAGGTACCACCACCGAGATCGTA---GACAAT 24319 Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | || ||| | | |||||| || |||||||| |||||||| || || || || | Sbjct 24320 GATC-TGGCGCTCGCCATCGTTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTAGGCT 24378 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || | ||| || || ||| || || ||||| | | || || || || || |||| Sbjct 24379 CGTTGACAATTCGGAGGACGTTGAGACCGGCAATGATACCGGCGTCCTTGGTGGCCTGTC 24438 Query 7695 GTTG 7698 | || Sbjct 24439 GCTG 24442 >seq470 Length=217628 Score = 91.5 bits (100), Expect = 2e-13 Identities = 226/339 (67%), Gaps = 12/339 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||| | || ||||| || ||| | ||||| || || | ||| Sbjct 146491 ATCGAAATCTTCACCACCGAGATGGGTATCACCGTTGGTGGACTTGACCTCGAAAACACC 146432 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || | | | || | ||| || ||||||||||| || || | | || Sbjct 146431 GTTCTGGATCTCAAGGATGGAGATATCGAAGGTACCACCACCAAGATCGTAGACAGCGAC 146372 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | | || | || ||| ||||||||||| || | ||| || || || || || Sbjct 146371 AATGCTGTCAGCCTC------CTTCTCGAGACCGTAGGCAAGAGCGGCGGCAGTAGGCTC 146318 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCT-TG 7692 || | | ||| || ||| ||||| ||||| ||| | || || || || ||| || Sbjct 146317 GTTGACGACACGGAGGACGTTGAGGCCGGCAAT--TTGACCAGCGTCCTTGGT-GCTCTG 146261 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||| || || ||||| |||||||| ||||| || ||||| |||| | ||| |||| Sbjct 146260 TCGCTGAGAGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTTCTTGATAGGCTTAGA 146201 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 ||| |||| || ||| | || ||||| ||| | || || Sbjct 146200 GAGGTACGCCTCGGCGGTCTCCTTCATCTTGTTGAGGAC 146162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128671636800