Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31]
520 sequences; 36,350,275 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq133 89.7 6e-13
>seq133
Length=197109
Score = 89.7 bits (98), Expect = 6e-13
Identities = 258/392 (66%), Gaps = 5/392 (1%)
Strand=Plus/Minus
Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770
|||| || || |||| || | || || || || || || ||||| || | ||||
Sbjct 125925 GAAAGGTTTGCCTGATCCCCGTTTCTGCCCACGGTACCAACCCTGCCTCGGCCGCTATGG 125866
Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGA-TGGTAACATAGACATCAAAG 154827
| || ||||| || || ||||||||||| | | || ||||||| | ||||| | |
Sbjct 125865 CTGGCATGAAGGTCGTCACCGTCAAGTGTGACGGCAAGACTGGTAACCTGGACATTGAGG 125806
Query 154828 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACC 154887
|||| || || ||| | | | ||| || | ||| ||| |||| ||||
Sbjct 125805 ATCTCAAGGCCAAGTGTGTCAAGCACGCTGATGAGCTCGCTGCTATCATGGTTACCTACC 125746
Query 154888 CATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACA 154947
| || || |||||| ||||| || | |||| || | || | | ||||| ||
Sbjct 125745 CCTCCACCTTTGGTGTCTTTGAGCCTGAGATTAAGCAAGTCTGCGATCTTGTTCACGAGC 125686
Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007
| ||||||| || || | || || || || | || || ||| | || || |
Sbjct 125685 ACGGTGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATCGGTCTTTGCTCTC 125626
Query 155008 CATGTGAGTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCA 155066
| |||| ||| || || ||||| || ||||| ||| | || || || |||||||||||
Sbjct 125625 CTGGTGA-TATCGGCGCTGATGTCTGCCATCTTAACCTCCACAAGACCTTCTGTATTCCC 125567
Query 155067 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098
|| || ||||| || ||||| || ||||||||
Sbjct 125566 CACGGTGGTGGTGGCCCTGGTGTCGGTCCTAT 125535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579209035116800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |