Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31] 520 sequences; 36,350,275 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq133 89.7 6e-13 >seq133 Length=197109 Score = 89.7 bits (98), Expect = 6e-13 Identities = 258/392 (66%), Gaps = 5/392 (1%) Strand=Plus/Minus Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770 |||| || || |||| || | || || || || || || ||||| || | |||| Sbjct 125925 GAAAGGTTTGCCTGATCCCCGTTTCTGCCCACGGTACCAACCCTGCCTCGGCCGCTATGG 125866 Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGA-TGGTAACATAGACATCAAAG 154827 | || ||||| || || ||||||||||| | | || ||||||| | ||||| | | Sbjct 125865 CTGGCATGAAGGTCGTCACCGTCAAGTGTGACGGCAAGACTGGTAACCTGGACATTGAGG 125806 Query 154828 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACC 154887 |||| || || ||| | | | ||| || | ||| ||| |||| |||| Sbjct 125805 ATCTCAAGGCCAAGTGTGTCAAGCACGCTGATGAGCTCGCTGCTATCATGGTTACCTACC 125746 Query 154888 CATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACA 154947 | || || |||||| ||||| || | |||| || | || | | ||||| || Sbjct 125745 CCTCCACCTTTGGTGTCTTTGAGCCTGAGATTAAGCAAGTCTGCGATCTTGTTCACGAGC 125686 Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 | ||||||| || || | || || || || | || || ||| | || || | Sbjct 125685 ACGGTGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATCGGTCTTTGCTCTC 125626 Query 155008 CATGTGAGTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCA 155066 | |||| ||| || || ||||| || ||||| ||| | || || || ||||||||||| Sbjct 125625 CTGGTGA-TATCGGCGCTGATGTCTGCCATCTTAACCTCCACAAGACCTTCTGTATTCCC 125567 Query 155067 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098 || || ||||| || ||||| || |||||||| Sbjct 125566 CACGGTGGTGGTGGCCCTGGTGTCGGTCCTAT 125535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579209035116800