Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31]
520 sequences; 36,350,275 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq118 161 2e-34
>seq118
Length=243722
Score = 161 bits (178), Expect = 2e-34
Identities = 383/570 (67%), Gaps = 9/570 (2%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | ||| |||||| || || ||||| |||||
Sbjct 112319 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 112260
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAA---AGACGAGCAGCATTTTCTCAAG 25593
||||||| | ||| |||| || | || | ||||||||| | || ||
Sbjct 112259 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 112200
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | | || ||||| || ||||| || || || || || |||||||| ||| ||
Sbjct 112199 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 112140
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| | | || || ||| | ||||| || ||||| ||||||||||| ||
Sbjct 112139 TTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGATG 112080
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTCGC 25772
|| || | ||||| || || || || | ||| || ||||| | ||| ||
Sbjct 112079 GAGAACATCCACTCCGAAACATACTCCCTCCTCATCGAT-ACCTACATCAAGGACCCTGC 112021
Query 25773 CGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGGCG 25830
| || | | || || || ||| | || ||| || || ||||| | |||||||
Sbjct 112020 CCAGCGTACATAC-CTCTTCAACGCCGTTGA-CACTATTCCTTGCATCCGAAAGAAGGCG 111963
Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890
|||||||| |||||| | ||| | |||| || | |||| || || ||
Sbjct 111962 GATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTCGCTCAGCGTCTTGTTGCT 111903
Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950
|||||||| || ||||| ||||| ||||||||| | ||||| |||||||||||||||||
Sbjct 111902 TTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCAAG 111843
Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010
|| || |||||| || ||| |||||| ||||||||||| | || ||||||
Sbjct 111842 AAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAGGGT 111783
Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040
|| |||| || |||||||| || ||| ||
Sbjct 111782 CTTCACACCGACTTTGCCTGTCTCCTCCAC 111753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928838762508800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |