Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31]
520 sequences; 36,350,275 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq393 214 2e-50
seq118 107 2e-18
>seq393
Length=304890
Score = 214 bits (236), Expect = 2e-50
Identities = 1043/1637 (64%), Gaps = 43/1637 (3%)
Strand=Plus/Plus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||| ||| | ||| ||||||| ||||| | || ||| || || || ||||| |||
Sbjct 7585 CCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGT 7644
Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328
||||||||||||| || ||||| |||| | | ||| ||| |||| || || |
Sbjct 7645 CTTGGAGACATACAACCTCATGTCAAGCAAGTTCT--TCACTCATGCAAGCCCCACTTTA 7702
Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
||||| || ||||| ||| || ||| | || ||||||||| | | | ||||||
Sbjct 7703 TTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAG 7762
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| || | |||||||| | || || | | ||||| || || ||| ||||
Sbjct 7763 GACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCT 7822
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508
|| |||||||| || || ||| | | |||| | ||| || || ||
Sbjct 7823 GGTGGTATTGGCTTGAACGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTACC 7882
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|||||| || | ||||| |||| ||||| || || || ||| ||| || || ||
Sbjct 7883 AATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTAC 7942
Query 75569 GTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGG 75622
|| | || ||| || |||| | || || |||| ||||| | |||||||||
Sbjct 7943 GTTGACCA---GGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAACCATGG 7999
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| ||||| || | ||||||||||| | ||| || || ||| | || |||| ||
Sbjct 8000 CACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGC 8059
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| | || || || | | | || ||||| || || |||||||||||||| || |||
Sbjct 8060 GCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGA 8119
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGG 75801
|| ||||| |||| | || || || || || || || || | ||| ||
Sbjct 8120 AACGGCGAATGGACTCTCATGTGCCCTAACGAATGC-CCTGGCCTTGCTGACTGCTACGG 8178
Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGT-AGAGCCAATGCGACT 75859
||| || ||||| || || ||| |||||| || ||| |||||| || | | || | |
Sbjct 8179 TGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGA-GAGGGTAAGGGTC---GCAAGT 8234
Query 75860 GTA-CCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917
|| | || | | | | ||||| | || ||||| | | ||||| ||||| |||| |
Sbjct 8235 CTATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACC 8294
Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977
| | ||||| ||||||||| || || ||||||||||||||||| | || || |
Sbjct 8295 CTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACCTTGGTACCA 8354
Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037
|| ||||| || || ||||| || || | || ||| | |||||| ||||
Sbjct 8355 TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTG 8414
Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTT 76094
||||||| | || || | | || || | | ||| ||||||| || || |
Sbjct 8415 TTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTTATCAACTATGAAGATGCTTGC---T 8471
Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154
|| | | || || || || |||| | ||||| | ||| | ||| |||
Sbjct 8472 ACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTTGTTGTCCGCAATTTGAACAAGATCA 8531
Query 76155 TTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214
| ||| || || || || | || || || || ||||| ||| |||| |
Sbjct 8532 TCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCA 8591
Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATT 76274
||||| | ||||| ||||||||||| |||| ||| || |||| | ||||| |
Sbjct 8592 TTGGTCTTGGTGTGCAAGGTCTCGCTGATGCCTTTCTTGCCCTCCGCATGCCCTTTGAGT 8651
Query 76275 CAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334
| ||| || ||| |||| | ||||| || ||||| || ||||| ||||
Sbjct 8652 CTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTA 8711
Query 76335 AGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393
|| |||| || | || | | ||||| |||| || || |||| || ||
Sbjct 8712 CTACG-TCTGTGCAACTCGCCAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCTCCCCT 8770
Query 76394 GCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACG 76451
|| || | || | || ||||| || |||| |||| || || || || | | | |
Sbjct 8771 GCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTCAAGCC-CTCTGACCTTTGGG 8828
Query 76452 ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 76511
||||||| ||| || ||||| | ||| | || |||||||| | | |
Sbjct 8829 ACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTG 8888
Query 76512 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCAT 76571
| || ||||| || ||| ||| | || || | || || || ||||||||||| || |
Sbjct 8889 CTCCTATGCCTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAATGCTTTGAGCCTT 8948
Query 76572 ACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGC 76631
|||| | |||||||||| | || ||| || || ||||| ||||||||
Sbjct 8949 ACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCT 9008
Query 76632 ACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA--- 76688
|| |||| || || | || ||||| |||||| | | ||||||| | | ||
Sbjct 9009 GGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCA 9068
Query 76689 -TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAAT 76747
|| ||| | | ||||| || || || ||| | | ||||| | || |||||| |
Sbjct 9069 TTGCTGATAAC----GGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGATCAAGGCT 9124
Query 76748 CTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGT 76807
|| ||| || |||||||| || | | | || | | ||||| || || |||
Sbjct 9125 CTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGGCTGCTGACCGT 9184
Query 76808 GGTCGCTTCATTGATCA 76824
||| ||||||||||||
Sbjct 9185 GGTGCCTTCATTGATCA 9201
>seq118
Length=243722
Score = 107 bits (118), Expect = 2e-18
Identities = 305/460 (66%), Gaps = 24/460 (5%)
Strand=Plus/Minus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
||||||| |||| ||| |||| ||||| || ||||||||||||||| ||| | |
Sbjct 111925 CCTTCGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCT 111866
Query 65129 TCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187
| ||| | || | ||| | |||||||| || |||||||| || || |||| || ||
Sbjct 111865 T-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAAC 111807
Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247
|| || ||||| || ||||||||||| ||| || |||||| || ||| || | ||
Sbjct 111806 GAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCC-TG--TCTCCTCCACTCT 111750
Query 65248 TTGCGTAATAGAC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304
| || ||| ||| | | | ||||| | ||| | | || || |||
Sbjct 111749 CACCTCAAGGGACGTGCCAGCAAACAGATGATCCAGGACATTATCACCGATGCCGTTTCT 111690
Query 65305 ATTGAGAAAGGGTTCATCTT--GGACGCACTCCCATGTAATCTCATCGGTATGAACTCTG 65362
|||||| | | ||| |||| || || ||||| ||| || |||| ||||||||
Sbjct 111689 ATTGAGCAGGAGTT--TCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCA 111632
Query 65363 AGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-G 65421
| ||| ||||||| || | || | |||||||||||| |||| | |
Sbjct 111631 ACCTCATGAAGCAGTACATCGAATTCGTCGCTGATCGTCTCCTC------GTTGCTCTCG 111578
Query 65422 CCACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTG 65476
|| | | | | || | | || || || ||||| ||||| ||||| |||||
Sbjct 111577 GCAACGAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTG 111518
Query 65477 ATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
|| |||||||||||||| |||||||| |||| |||||
Sbjct 111517 GCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGCTGACTA 111478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596565722297600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |