Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31]
520 sequences; 36,350,275 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq448 98.7 7e-15
seq431 91.5 1e-12
>seq448
Length=194427
Score = 98.7 bits (108), Expect = 7e-15
Identities = 89/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
||||| ||||||||| | |||| || |||||||| |||||||||||| | |||||||||
Sbjct 129714 GGTAAGGAAGGTCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 129773
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTC 432399
|| || |||||| |||| | || || | ||| |||| || ||||| ||||
Sbjct 129774 ACCGTCATTACTGGTGATGCCAACCTTTCCCTCCATGAGGTCGGTGTGCCTC 129825
Score = 86.0 bits (94), Expect = 5e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
|| ||||||||||| | ||||||||||| |||||| | ||| |||| || | || |||
Sbjct 131157 GAGTTTTTCTTCCACGCCATGGCTGGTCGAGAAGGTCTCATTGATACTGCGGTCAAGACT 131216
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239
||||| |||||||| ||||| || | | |||||| ||||||||
Sbjct 131217 GCTGAAACTGGTTACATTCAGCGACGATTGGTCAAGGCTCTTGAAGA 131263
>seq431
Length=164038
Score = 91.5 bits (100), Expect = 1e-12
Identities = 194/290 (67%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241
|| ||||| || || ||||||||||| ||||| | ||| | || | |||| | ||
Sbjct 21251 ACGAGACGGTTGTCGAAATCTTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACC 21310
Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301
| ||| | || || |||| | | |||| ||||| ||| |||||||| | |||
Sbjct 21311 TCGAAGATACCCTCCTCAATGGTAAGGAGAGAGACATCGAAGGTACCACCACCAAGATCG 21370
Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361
|| || || || || || || || || |||||||| || |||| || |||
Sbjct 21371 AAGATGAGGACGTTGCGCTCACCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCA 21430
Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421
|| || || || || || |||| | ||| || ||||| || || || ||||| ||
Sbjct 21431 GCGGTAGGCTCGTTGATGATTCGGAGAACGTTGAGACCGGCGATGAGACCCGCATCCTTG 21490
Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471
|| || || | || || ||||| || || ||||| || || | ||||||
Sbjct 21491 GTAGCCTGACGCTGAGAGTCGTTGAAGTAGGCAGGGACGGTGACAACGGC 21540
Score = 89.7 bits (98), Expect = 4e-12
Identities = 242/368 (66%), Gaps = 3/368 (1%)
Strand=Plus/Plus
Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500
||||| |||||||| | ||| || ||||| ||||| || || || || | |||||||
Sbjct 19999 ATACCGTTGGCATCGAGATCGAAGGTGACCTCAATCTGGGGAACACCACGGGGAGCAGGG 20058
Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560
||||| || | | || | |||| || || || || ||| | || |||
Sbjct 20059 GGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTGGTGCGCTGGCGCTCA 20118
Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620
|||||| | | |||||| || ||| || || || || | || | || || |
Sbjct 20119 CCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTGTCGGAGAAGGTAGAGAAGACCTCG 20178
Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680
|| || || ||||| || ||||| | || | |||||||| |||||||||||
Sbjct 20179 GACTTCTTGGTGGGAATGGTGGTGTTGCGGGGGATGAGCTTGGTCATCATACCACCAGCG 20238
Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 281738
|| || | ||| ||||| ||||| | || || | || | ||| | || | | ||
Sbjct 20239 GTCTCGATACCGAGAGAGAGAGGGGCAACGTCGAGGAGCAGAATCTCGTTGGTGGCCTTG 20298
Query 281739 C-ATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797
| | || | |||| |||||||| || || | ||| ||||| || |||||||| |||
Sbjct 20299 CTAGAGGTGTCACCAGAGAGAATAGCAGCCTGGACAGCGGCACCGTAGGCAACAGCCTCA 20358
Query 281798 TCAGGATT 281805
||||| ||
Sbjct 20359 TCAGGGTT 20366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740604870197520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |