Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31] 520 sequences; 36,350,275 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq496 134 1e-26 seq170 107 2e-18 seq314 95.1 1e-14 >seq496 Length=70014 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || |||||||| || |||||||||||| | ||| || ||| ||| Sbjct 43586 ACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCGTCCTCG 43645 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || |||||||| ||||||||||| || || || || || || || || Sbjct 43646 AGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTGG 43705 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| || || || ||||| || ||||| || Sbjct 43706 ATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTG 43765 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| |||||||| Sbjct 43766 CCTGTGAGGGTCTTGACGAAGATTTGCAT 43794 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || || || ||||| ||||||||||| ||| | |||| | || ||| Sbjct 44042 ACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGGCCATCCTCG 44101 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || |||||||| ||||||||||| || || ||||| || || || ||| Sbjct 44102 AGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGA 44161 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || || || || || || ||||| ||||| || || Sbjct 44162 ATCTTGGACTTGACGTTGTCGATAGTATCAGATGACTCAACCTCGAGGGTAATAGTCTTG 44221 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || ||||| || ||||| Sbjct 44222 CCGGTCAAGGTCTTGACGAAGATCTGCAT 44250 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || || || ||||| ||||||||||| ||| | |||| | || ||| Sbjct 43814 ACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGGCCATCCTCG 43873 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || |||||||| ||||||||||| || || ||||| || || || || Sbjct 43874 AGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGG 43933 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | |||||||| || || || ||||| || ||||| || Sbjct 43934 ATCTTGGACTTCACATTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTG 43993 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| |||||||| Sbjct 43994 CCTGTGAGGGTCTTGACGAAGATTTGCAT 44022 >seq170 Length=295105 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| ||||| || ||||||||||||| | |||| | || |||||||| Sbjct 94067 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTG 94008 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || ||||| || | |||||||| || || || || || || || || || || || Sbjct 94007 CTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 93948 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | |||||||| || ||||| || || || || || || || || Sbjct 93947 GGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGT 93888 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | || || |||||||| ||||| Sbjct 93887 GAGGGTCTTGACGAAAATCTGCAT 93864 >seq314 Length=211226 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| | ||| | || |||||||| ||||| || || | Sbjct 97956 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 97897 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 |||| ||||||||||| || || ||||| || || || || || || ||||| || Sbjct 97896 TCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 97837 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || || || ||||| || ||||| || || || | || || |||| Sbjct 97836 CGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 97777 Query 134704 AA 134705 || Sbjct 97776 AA 97775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395114910400