Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31] 520 sequences; 36,350,275 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq393 223 4e-53 seq118 109 7e-19 >seq393 Length=304890 Score = 223 bits (246), Expect = 4e-53 Identities = 1010/1583 (64%), Gaps = 41/1583 (3%) Strand=Plus/Minus Query 110524 AATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTG 110583 ||| ||||| || || || ||| |||||| || | ||||| | | ||| ||||| Sbjct 9148 AATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTG 9089 Query 110584 GATGGAACCCCCCGCCTTCACCA----TGAGATCCTTCATATCCTTGGACCAGAGACCAA 110639 ||| ||||| | ||| || || | | ||||||| | | |||||| ||||| | Sbjct 9088 GATAGAACC----GTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCA 9033 Query 110640 TCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTC 110699 | | || || |||| || |||||||| ||||| || || ||| || Sbjct 9032 TGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTC 8973 Query 110700 TTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTG 110759 | |||||||||| | ||||| || ||||||||||| || || || | || || | Sbjct 8972 GGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCG 8913 Query 110760 CGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGA 110819 ||| ||| || ||||| || || | | |||||||| || | ||| | ||||| Sbjct 8912 AGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGA 8853 Query 110820 TGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTC 110877 || ||| |||||||| | | | || || || || |||| ||||||| Sbjct 8852 CATCCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG-GGCTTGACATTCC-ACATGTC 8795 Query 110878 AAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGC 110937 ||||| || | || | || || || || |||| ||||| |||| ||||| | Sbjct 8794 GAACTGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTC 8735 Query 110938 TTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 110996 | || | || ||||| || |||| ||||| || ||||| || ||||| | Sbjct 8734 CTTGGCGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCT 8676 Query 110997 CATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 111056 |||| ||| || ||| || ||||| | |||| || ||| |||| | Sbjct 8675 TGTTCAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAG 8616 Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116 |||||||||| ||||| | |||||| |||| ||| ||||| || || || || | Sbjct 8615 CGAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTT 8556 Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 || || || || ||| |||| ||| | ||| | ||||| | |||| Sbjct 8555 GGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGA 8496 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAA 111233 || || || || | | || | || || ||||||| ||| | | || | Sbjct 8495 CCTCGTGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCA 8439 Query 111234 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 111293 | | | || || | ||||||||||| |||||| | ||| || | || | Sbjct 8438 GAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCT 8379 Query 111294 CTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGC 111353 | || || | |||||| || || || || | ||||||||||||||||| |||| Sbjct 8378 CAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGC 8319 Query 111354 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCT 111413 | |||||||||||||||| | || | || ||||| ||||| | | ||||| || | Sbjct 8318 AGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGT 8259 Query 111414 TCCAAACAT-CGGCGGCTGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTG 111470 ||||| | | | | || | || | | ||| ||| | ||||| |||||||||| Sbjct 8258 ACCAAAGTTTCTGAGCCTTGATAGACTTGCGA---CCCTTACCCTCTCTCTCGTACTTTT 8202 Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGA 111529 ||| || || ||||| || ||||| ||| | || || || || || || || Sbjct 8201 CGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGG 8143 Query 111530 CAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589 || | |||| ||||| || | ||| || |||||||||||||| || || ||||| Sbjct 8142 CACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAA 8083 Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649 || | | | || || || | | || |||| || | ||| || || ||| | ||| Sbjct 8082 AGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCA 8023 Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCC 111703 |||||||| | || || ||||||||||| ||||| |||| |||| || || | Sbjct 8022 AGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGC 7963 Query 111704 TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763 || | ||| | || | || || || || ||| ||| || || || ||||| ||| Sbjct 7962 TTGTTA---CCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGA 7906 Query 111764 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCA 111823 | ||||| | || |||||| || || || ||| | |||| | | Sbjct 7905 ACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGG 7846 Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 111883 ||| || || |||||||| |||||| ||| || || ||||| | | || || Sbjct 7845 TGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTA 7786 Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943 | |||||||| | || ||||||||| | | | ||||||||| || | ||| Sbjct 7785 TCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGA 7726 Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GG 112001 || ||| ||||| || ||||| | || || |||| ||| ||| | | |||| | Sbjct 7725 GGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTG 7668 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 |||| || |||||||||||||||| ||||| || || || ||| || | |||| Sbjct 7667 ACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGA 7608 Query 112062 CCCGCATGAACATGTACTGTGGG 112084 | ||||||| ||| | ||| ||| Sbjct 7607 CTCGCATGATCATATGCTGCGGG 7585 >seq118 Length=243722 Score = 109 bits (120), Expect = 7e-19 Identities = 335/507 (66%), Gaps = 26/507 (5%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| | || |||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct 111478 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 111537 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 122484 ||||| || || || | | || | | | | || | | |||| |||| Sbjct 111538 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCAAC------GAGG 111591 Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544 |||||||| | || | || ||||||| ||| | |||||||| |||| ||| Sbjct 111592 AGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGG 111651 Query 122545 TTACATGGGAGTGCGTCC--AAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGA 122602 ||| ||||| || || |||| ||| | | |||||| ||| || || | | | Sbjct 111652 GCACAAGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATAA 111709 Query 122603 TGGCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGG 122659 || | ||||| | | | ||| ||| || | || | || ||| || || Sbjct 111710 TGTCCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GG 111766 Query 122660 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTG 122719 |||| || ||| ||||||||||| || ||||| || || || || |||| ||||| | Sbjct 111767 CAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCAG 111826 Query 122720 GCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||| || |||||||| | ||| | || | ||| || | ||| |||||||||| Sbjct 111827 GCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATA 111885 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTGCATCAAA 122837 ||||| || ||||| |||| ||| || | ||||||| || | ||| | | | Sbjct 111886 CCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGGTAGAG-TTCTTATCCTGGAT 111944 Query 122838 CCATTTCATTGCCCATTTCGCCTTCTT 122864 |||| || ||||| | ||||||||| Sbjct 111945 CCATCGGATGGCCCAATCCGCCTTCTT 111971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027917792000