Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31] 520 sequences; 36,350,275 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq393 174 2e-38 >seq393 Length=304890 Score = 174 bits (192), Expect = 2e-38 Identities = 1075/1703 (63%), Gaps = 57/1703 (3%) Strand=Plus/Minus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 9318 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 9259 Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947 || || | |||| | ||| || | |||| | ||| | | || || ||| Sbjct 9258 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 9199 Query 117948 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 118004 || |||||| || || || || ||||| | |||| ||| || || ||| Sbjct 9198 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 9142 Query 118005 CACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAT 118064 ||||||||| |||| || ||| || || | ||||| | ||| || ||||| || Sbjct 9141 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 9082 Query 118065 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 118121 || | | || ||| || | | ||||||| | | ||||| ||||| || | Sbjct 9081 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 9025 Query 118122 AGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 118178 ||||||| |||| || |||||||| ||||| || || ||| || | Sbjct 9024 AGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGT 8968 Query 118179 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTG 118238 | ||||| |||| ||||| ||||||||||| || ||||| || | || || | || Sbjct 8967 TGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTA 8908 Query 118239 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 118298 ||| || ||||| || || | ||| || ||||| |||| ||| | | | | Sbjct 8907 CTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCC 8848 Query 118299 TCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 118356 || ||| | |||||||| | | | || | || | | |||||| || |||| Sbjct 8847 TCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAACT 8790 Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 |||| ||||| | || || || || |||| || || || || || || ||| | Sbjct 8789 GGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGG 8730 Query 118417 CCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 | | || | || || ||||| ||||| || || || || || || | ||| Sbjct 8729 CGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 8671 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | | ||||| || ||||| | | ||| || ||| |||| |||||| Sbjct 8670 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGA 8611 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG 118595 ||||| ||||| || ||||| || || || | ||| || || ||||| | || Sbjct 8610 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACA 8551 Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655 || || || ||||| | | | || | ||| | ||||| | |||| || Sbjct 8550 GGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCG 8491 Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCG 118712 || ||||| | | | || | || || ||||||| ||| | | || || | Sbjct 8490 TGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGAC 8434 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 | || || || || || |||| | |||||| | ||| || || || || ||| Sbjct 8433 AAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTG 8374 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTACACG 118830 |||| ||| || || ||||| || | ||||||||| || ||| ||| | || || Sbjct 8373 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTGCAGT 8316 Query 118831 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 118890 ||||||||| |||||| | || | || ||||| || |||| || ||||| || | || Sbjct 8315 GATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACC 8256 Query 118891 AGACATCGGCAGC--TGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948 | | | ||| || | | | ||| | || |||| |||||||||| ||| Sbjct 8255 AAAGTTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCT--CTCGTACTTTTCGTA 8198 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT-GGGCAGA 119007 || || ||||| || ||||| | || | || || || || || | ||||| | Sbjct 8197 CAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGGCACA 8139 Query 119008 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 119067 ||||| ||||| || ||| || ||||||||||| || || |||||||| || | Sbjct 8138 TGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAG 8079 Query 119068 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127 | |||| || || ||| ||| | || || | || ||||| || | || | | Sbjct 8078 CTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGA 8019 Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG-- 119185 | || | || || |||||||| ||||| ||||| | |||| | || | | || Sbjct 8018 ACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACC---AGGTCGCT 7962 Query 119186 ----ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241 |||| |||||| || || | |||||| ||| || ||||| ||||| |||| || Sbjct 7961 TGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGA 7902 Query 119242 TACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTG 119299 |||| | ||| ||||| || || ||| || ||| | | |||| | || ||| Sbjct 7901 TACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGATTCGGTG 7844 Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359 | || || |||||||| || ||| ||| || || || || | |||| | | Sbjct 7843 GGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATC 7784 Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419 |||||| ||||| || ||| |||| | | | |||||||| || | ||||| Sbjct 7783 GTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGG 7724 Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGAC 119477 | || ||||| |||||||| | ||| || | || || ||| | | |||| ||| Sbjct 7723 CTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTGAC 7666 Query 119478 ATCTTGTCGTAGGTCTCCAAGAC 119500 || || ||| ||||||||||| Sbjct 7665 ATGAGGTTGTATGTCTCCAAGAC 7643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431180171200