Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31]
520 sequences; 36,350,275 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq496 125 6e-24
>seq496
Length=70014
Score = 125 bits (138), Expect = 6e-24
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045
|||||||||| || || || || ||||||||||| ||||||| || || || || | |
Sbjct 44252 CCATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACTATTACCCTCGAGGTTGAGTCAT 44193
Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105
| || | || || | ||||| || ||||| ||||| || ||||| || || ||||
Sbjct 44192 CTGATACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGATC 44133
Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165
| ||||| || || | ||||||||| || | || || | ||| | ||||||||||
Sbjct 44132 AGCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGATTACA 44073
Query 27166 ACATTCAAAAGGAGTCGAC 27184
||||||| |||||||||||
Sbjct 44072 ACATTCAGAAGGAGTCGAC 44054
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || |||||| | || || || || || || | |||
Sbjct 44022 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 43963
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || || || ||||| || ||||| || || |||||
Sbjct 43962 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAG 43903
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | ||||||||| || | || || | ||| | ||||||||||||
Sbjct 43902 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGATTACAAC 43843
Query 27168 ATTCAAAAGGAGTCGAC 27184
||||| |||||||||||
Sbjct 43842 ATTCAGAAGGAGTCGAC 43826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434915573030400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |