Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31] 520 sequences; 36,350,275 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq131 86.0 6e-12 >seq131 Length=307609 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 6493 AATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGAT 6552 ||||| | || ||| || ||| ||||| || | || |||| | ||| || | Sbjct 217934 AATTTCCAACTCGGGAAAGTTTCGCGGCTCGCGCTCAAGTTGGACCTTGAGGGCATCAAC 217993 Query 6553 GTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCC 6612 ||| | ||||| | ||| ||||| |||| ||| || ||||| |||| | | Sbjct 217994 GTGATCGAGGTACACATGAGCATCACCCATGACATGGGTAAGGCTTCCAGGGACCAGCTC 218053 Query 6613 CACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCC 6672 ||| || || ||||||| || ||||| ||||| |||||||||||||| || || || Sbjct 218054 ACAGACGTGTGCCATCATGTGTGTCAGCAGCGCGTAGCTAGCAATGTTGAAGGGAACGCC 218113 Query 6673 TAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 | |||||||| | ||||||||||| | ||| ||| Sbjct 218114 CAGACCCATGTCGCAAGATCGTTGATATAACTGACAG 218150 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 ||| ||| | ||||||||||| | |||||||| | || || || |||||||||||||| Sbjct 218150 CTGTCAGTTATATCAACGATCTTGCGACATGGGTCTGGGCGTTCCCTTCAACATTGCTAG 218091 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||||| ||||| || ||||||| || || ||| | | |||| ||||| || Sbjct 218090 CTACGCGCTGCTGACACACATGATGGCACACGTCTGTGAGCTGGTCCCTGGAAGCCTTAC 218031 Query 34756 GCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCT 34815 ||| |||| ||||| ||| | ||||| | ||| | || ||| | |||| || Sbjct 218030 CCATGTCATGGGTGATGCTCATGTGTACCTCGATCACGTTGATGCCCTCAAGGTCCAACT 217971 Query 34816 GCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATT 34852 | || ||||| ||| || ||| || | ||||| Sbjct 217970 TGAGCGCGAGCCGCGAAACTTTCCCGAGTTGGAAATT 217934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448259486294400