Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03]
6 sequences; 38,047,942 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq3 127 4e-24
seq2 84.2 5e-11
>seq3
Length=7792947
Score = 127 bits (140), Expect = 4e-24
Identities = 160/220 (73%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473
||||||| || ||| ||| | || ||| ||| | ||||||||| | | || |||
Sbjct 2175664 AGGAGTTTCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGA 2175605
Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533
||||||||||||||||| || || || | | ||||| || || ||||||| ||||
Sbjct 2175604 AGCAGTACATCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCGGCAACGAGAAGGTGT 2175545
Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593
|||| || | ||||| || | || |||||| ||| || ||| || ||||||||||
Sbjct 2175544 ACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACT 2175485
Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633
||||||| ||||| || |||||| |||| | | |||||
Sbjct 2175484 TCTTCGAGAAGCGCGTTGCTGACTACCAGAAGGCCGGTGT 2175445
>seq2
Length=8997558
Score = 84.2 bits (92), Expect = 5e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916
|||||| || || | ||| |||| || |||||||| ||||| || || || | ||
Sbjct 7209732 GGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGACTTTCCGGAACC 7209673
Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAG 319976
||| || ||||| |||||||| || | || || || || || | || | ||| ||
Sbjct 7209672 GTTGGGACCACAAAGACCGTAACGCTGACCACGCTTGAGACGGAGGTGAGTCTGGTTGAG 7209613
Query 319977 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030
|||||| || |||| || || ||||| ||| ||| | || |||||||||||
Sbjct 7209612 AAGAATCTTGGCACCGTAGGCAAGAGAGAATGTACAGTTGCAAAGATCCTCACC 7209559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823918679780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |