Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03] 6 sequences; 38,047,942 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 113 5e-20 >seq1 Length=11760891 Score = 113 bits (124), Expect = 5e-20 Identities = 191/273 (70%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 |||||||| |||||||| || ||||||||||||| || |||||| | || || ||| Sbjct 3508832 AGCTGGTCTACGCCCTGGCCGGTATAATCTGTCTTGGCATCGACGTACTCAGCGCCAAAG 3508891 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCG 146115 |||| ||| ||||| ||||| || || || ||||| ||| ||| | || || || Sbjct 3508892 TGCCGCCATTGGAAGCCGTATACAGGACCTAGGTCGCCGACCTCACGATGTTGAAGACCA 3508951 Query 146116 GCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGG 146173 |||| || || || || ||||| | ||||||||||||| || |||| | | Sbjct 3508952 AGGTTATCGAGAAATTCGCGCGAGCCGTTTCCATCCCAGATCTTGATACCGGCCTCACTG 3509011 Query 146174 AGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCC 146233 ||| ||| ||||| ||| ||| ||||||||||| ||||| | | ||| | | Sbjct 3509012 AGA-CTC-TTGGAAGAGGTGTTACCCTCAATGAACCAGAGGAGCTCGGCAATGACGGCGC 3509069 Query 146234 TCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||||| | ||| ||||| || ||||||| Sbjct 3509070 GAGTGAAGACACGCTTCGTGGTAAGGAGGGGGA 3509102 Score = 91.5 bits (100), Expect = 2e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 || |||| ||| |||| || ||||| | |||||| || || || || |||| ||| ||| Sbjct 3508469 AGTTGGACCTTGAGGGCATCAACGTGATCGAGGTACACATGAGCATCACCCATGACATGG 3508528 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | | | || || | || | || ||| || | ||||| |||||||| | |||| Sbjct 3508529 GTAAGGCTTCCAGGGACCAGCTCACAGACGTGTGCCATCATGTGTGTCAGCAGCGCGTAG 3508588 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || || ||||||||||| || ||||| |||||||| | || || || || | ||| ||| Sbjct 3508589 CTAGCAATGTTGAAGGGAACGCCCAGACCCATGTCGCAAGATCGTTGATATAACTGACAG 3508648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076755744240