Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03]
6 sequences; 38,047,942 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq3 383 4e-101
>seq3
Length=7792947
Score = 383 bits (424), Expect = 4e-101
Identities = 1146/1739 (66%), Gaps = 42/1739 (2%)
Strand=Plus/Plus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
|||| ||| ||||||||||||||| | ||||| || ||| |||| ||| | |||
Sbjct 1386448 ATTGCTGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGAT 1386507
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCA 363559
|||| | | || ||||| || || | | | || || | ||||| || || |
Sbjct 1386508 ATTGAGCGTGTCTTGGAGACATACAACCTCATGTCAA-GCAAGT-TCTTCACTCATGCAA 1386565
Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619
|| || | | ||| || || |||| | || ||| | || || ||||| ||| |
Sbjct 1386566 GCCCCACTTTATTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTG 1386625
Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679
| |||||||| || ||| || ||||||| || || || |||| |||||| | ||||
Sbjct 1386626 ATATGAAGGAGGACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTT 1386685
Query 363680 CCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTA 363737
|||||| || || || ||||| | | || |||| | ||||| || | | |||
Sbjct 1386686 CCAAGATGGCTGGTGGTATTGGCTTGAACGC-CCACCGAATCCGTGCCACTGG-CTCTTA 1386743
Query 363738 CATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796
||| ||| || || |||| | || || | ||||||||||| |||||||| |||
Sbjct 1386744 CATCGCCGGTACCAATGG-TACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACA 1386802
Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856
| ||||| | ||||| ||||||||||| ||||| || || || || || || |
Sbjct 1386803 ACACTGCTCGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACC 1386862
Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAA 363915
| || || || ||||| | || ||||| ||||| ||||| || || ||||| ||
Sbjct 1386863 TTGAACCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAG- 1386921
Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975
||||| | || || ||||| ||||||| || |||||| | |||| | ||| ||||||
Sbjct 1386922 GAGGAGGTCCGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAG 1386981
Query 363976 CGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034
|| || ||| | | |||| || | ||| | ||||| ||||||| || || ||| |
Sbjct 1386982 CGTGTCGAGAGAAACGGCGAAT-GGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGC 1387040
Query 364035 CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094
|| | |||||||| | || ||||| ||||||||||| || ||||| ||||
Sbjct 1387041 TGACTGCTACGGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGTAAGGG 1387100
Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154
||| ||| | || || ||||| || |||| ||||| | || | |||| |||||
Sbjct 1387101 TCGCAAGTCTATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACAGAGAC 1387160
Query 364155 AGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213
|||| ||||| | ||| | ||||| ||| ||||| |||||| ||||| || |||
Sbjct 1387161 CGGAA-ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACC 1387219
Query 364214 TTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272
||||||| | || | || |||||| || || ||||| ||||||||| ||| || ||
Sbjct 1387220 TTGGTACCA-TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGAT 1387278
Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA------AAGAT 364326
||| || || || |||||||| || | | || || | ||| | | |||||
Sbjct 1387279 GAGGTCGCTGTTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTTATCAACTATGAAGAT 1387338
Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGAC 364386
| | | ||| | || | || | || || || | || | ||||| | ||
Sbjct 1387339 GCTTGCTACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTTGTTGTCCGCAATTTGAAC 1387398
Query 364387 AAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGC 364441
||| | |||||| || | || || | | || || || ||| || ||||
Sbjct 1387399 AAGATCATCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGC-----AACATGC 1387453
Query 364442 GTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGA 364501
|||| || || |||||||||||||| || || |||||||| | ||| | ||| |
Sbjct 1387454 GTCACCGACCCATTGGTCTTGGTGTGCAAGGTCTCGCTGATGCCTTTCTTGCCCTCCGCA 1387513
Query 364502 TGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATT 364561
|| | ||||| || ||||| ||||||| || || ||| | ||||| || || || ||
Sbjct 1387514 TGCCCTTTGAGTCTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACC 1387573
Query 364562 TTGCCGCAATGACTGCTTC-GTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTAT 364620
|| || | ||| | || ||| | | | ||| | || || ||||| || |
Sbjct 1387574 ACGCTGCCCTTACTACGTCTGTGCAACTCGCCAAGGAGGAA-GGTCCCTACTCCACCTTC 1387632
Query 364621 GAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCT 364680
|||| |||||| || |||| | ||||||| || | |||||||||| ||| |||
Sbjct 1387633 AAGGGCTCCCCTGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCTCT 1387692
Query 364681 GTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--T 364738
| || ||| ||||||| | || || | || |||| || |||| |||||| |
Sbjct 1387693 GACCTTTGGGACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGT 1387752
Query 364739 C-CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAG 364797
| |||||| || || ||||| || || ||| | ||||| || || ||||||||
Sbjct 1387753 CTGCTCGTT---GCTCCTATGCCTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAA 1387809
Query 364798 TGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCG 364857
||||| || || | || ||| | || |||||| || ||| | || || || | |
Sbjct 1387810 TGCTTTGAGCCTTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAG 1387869
Query 364858 GTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATG 364917
|| || || | || ||||||||||| |||| || || ||| || |||
Sbjct 1387870 GTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTATG 1387929
Query 364918 AAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGAT 364977
|||||| ||||| || | ||| |||||| | |||||||| || | || | ||
Sbjct 1387930 AAGAACCGCATCATTGCTGATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCGAG 1387989
Query 364978 CTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCG 365037
| ||| || | ||||| || || ||||| ||||| |||| | | | |||||
Sbjct 1387990 ATCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGGCT 1388049
Query 365038 GCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCA 365097
|| || || ||||| || || |||| ||||| | ||| | ||||| | ||
Sbjct 1388050 GCTGACCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATTCACATGAAGGACCCT 1388109
Query 365098 ACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
||| | |||| | || |||||| ||| || ||||| |||||| ||||| ||
Sbjct 1388110 ACCATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACTGG 1388168
Score = 104 bits (114), Expect = 6e-17
Identities = 311/468 (66%), Gaps = 23/468 (5%)
Strand=Plus/Minus
Query 22190 ACGAACAACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTT 22249
|||| ||| | || ||| | ||||| || ||||| ||| || | ||||| || ||
Sbjct 2176201 ACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCA 2176142
Query 22250 TTGAGAATCTAGT-GACTAATTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTC 22308
||||||||| || || ||| || | || | || ||| ||||| |||| |||
Sbjct 2176141 ATGAGAATCTTGTTGAGCGATTCAGCGGC-GAGGTCCAGATCCCCGAGGCTCGATGCTTC 2176083
Query 22309 TATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTCTATGATGCTACAG 22368
|||||| | || || ||||| || || | ||| | |||||||| || || |
Sbjct 2176082 TATGGTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCC------CTCC-- 2176031
Query 22369 TCACTCG-TAGA-AGATAAAG-AC---GAACAACGAA---ACTTATTCCGCGCGATTCGC 22419
||| ||| || | || ||| || | || || | || | ||| ||| || |
Sbjct 2176030 TCA-TCGATACCTACATCAAGGACCCTGCCCAGCGTACATACCTCTTCAACGCCGTTGAC 2175972
Query 22420 ACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAAT--GAAC 22477
|| |||| | || || ||||| |||||||| | |||||| | || ||||
Sbjct 2175971 ACTATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGATAAGAAC 2175912
Query 22478 GTT-CATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGA 22536
| | ||||| | |||||| |||| ||||||| ||||| || || ||||| ||
Sbjct 2175911 TCTACCTTCGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGT 2175852
Query 22537 GCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCA 22596
|| ||| | | ||||| ||||| || || |||| | ||||| ||||| | |||||
Sbjct 2175851 GCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCT 2175792
Query 22597 AATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644
|| ||| | ||| || |||||||||||||| ||||| ||||| |||
Sbjct 2175791 AACGAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGT 2175744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353499804692
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