Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03]
6 sequences; 38,047,942 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 6e-25
seq2 127 2e-24
seq1 95.1 1e-14
>seq3
Length=7792947
Score = 129 bits (142), Expect = 6e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || || || | ||| |||||||| || |||||||| ||||||
Sbjct 6169722 CCACCACGAAGGCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 6169781
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| |||||||| || || |||| | |||||||||||||| |||
Sbjct 6169782 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGG 6169841
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 6169842 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 6169901
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| | ||| | || || || || || || || ||||||||||||||||
Sbjct 6169902 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATGA 6169950
>seq2
Length=8997558
Score = 127 bits (140), Expect = 2e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
||||||||||| ||||||||||||||| | |||||| ||||| |||||||||||
Sbjct 2573241 GTCGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 2573300
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| | || || |||||||| || |||||||| || || ||||| || || ||||
Sbjct 2573301 GCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 2573360
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | |||||| | ||||| | |||| ||||| || || ||||| | ||
Sbjct 2573361 ACGTTGTCGATAGTATCAGATGACTCAACCTCGAGGGTAATAGTCTTGCCGGTCAAGGTC 2573420
Query 131218 TTTACGAAAATCTGCATG 131235
|| ||||| |||||||||
Sbjct 2573421 TTGACGAAGATCTGCATG 2573438
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
||||||||||| || |||||||| ||| | |||||| ||||| |||||||||||
Sbjct 2573013 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 2573072
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| | || || |||||||| || |||||||| || || ||||| ||| || |||
Sbjct 2573073 GCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTC 2573132
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || |||| ||||||| |||| ||| | ||| || || || || ||
Sbjct 2573133 ACATTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTC 2573192
Query 131218 TTTACGAAAATCTGCAT 131234
|| ||||| || |||||
Sbjct 2573193 TTGACGAAGATTTGCAT 2573209
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | ||| || ||||| || |||||||| |||
Sbjct 2572701 CCACCACGAAGACGAAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAG 2572760
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| ||||||||||| ||| | || || |||||||| || ||||||
Sbjct 2572761 AGGGTTCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGG 2572820
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | ||| |||| |||||||
Sbjct 2572821 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACTCGACC 2572880
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|| | ||| | ||| || ||||| | || || ||||
Sbjct 2572881 TCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGA 2572917
>seq1
Length=11760891
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | ||| || ||||| ||||||||||| ||| |||
Sbjct 6455776 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 6455717
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || |||||||| ||||| ||||| || || ||||| ||| || ||||| | |
Sbjct 6455716 TCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 6455657
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | ||||||| |||| ||| | ||| || || || || || || ||||
Sbjct 6455656 CGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 6455597
Query 131225 AA 131226
||
Sbjct 6455596 AA 6455595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012764599040
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