Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03]
6 sequences; 38,047,942 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq3 163 3e-35
>seq3
Length=7792947
Score = 163 bits (180), Expect = 3e-35
Identities = 374/558 (67%), Gaps = 5/558 (1%)
Strand=Plus/Plus
Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151
|| ||||||||||| || | ||| || || || || || | ||| || || | | |
Sbjct 2175745 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGA 2175804
Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
|| || | || || || ||||||||||| || || |||||||| ||| || ||
Sbjct 2175805 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAG 2175864
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT- 93270
||||| || ||||| ||||| || |||| ||| | || || | | | ||| | ||
Sbjct 2175865 ATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGGTAGAGTTCTTA-TCCTG 2175923
Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330
||||||| | |||||||| || || || || ||||| | || || | |||||
Sbjct 2175924 GATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTT 2175983
Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390
|| ||||| |||| | | | || ||||| |||||||| | || || || |
Sbjct 2175984 GAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATGT 2176043
Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450
||| || |||| |||||||| || ||||| || ||||| |||| ||| || | |||
Sbjct 2176044 TTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGAT 2176103
Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510
||| || || |||| ||| || ||||| |||||||| || || ||||| || ||
Sbjct 2176104 CTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAGC 2176163
Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATC--ATCTTTA-AGCTTATCCCA 93567
|| ||||| | || || || || | || ||| || | | | | || | |||
Sbjct 2176164 GAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCCA 2176223
Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627
||| ||||| || || ||||||| || || | ||||| || || || ||||| ||
Sbjct 2176224 GTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCTT 2176283
Query 93628 TTTGTACATATCCCATAT 93645
|||||||| | ||| ||
Sbjct 2176284 CTTGTACATTTGCCAGAT 2176301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860758235440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |