Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03] 6 sequences; 38,047,942 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2 109 5e-19 >seq2 Length=8997558 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || || | ||||| || || |||||||||||||| | Sbjct 2573210 ACCGCCACGAAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAATCGGA 2573269 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | || || |||||||||||||| |||| | |||||||| || ||||| Sbjct 2573270 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGG 2573329 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | |||||| | || || Sbjct 2573330 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTATCAGATGACTCAAC 2573389 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||||| || || ||||| || ||||| Sbjct 2573390 CTCGAGGGTAATAGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 2573437 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || ||||| || || |||||||| || | || ||| || |||| Sbjct 2572715 AAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCGTC 2572774 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || |||||||||||||| |||| | |||||||| || ||||| || || || || || Sbjct 2572775 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTGTC 2572834 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || || | || || || | || | ||| Sbjct 2572835 CTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTGATGGT 2572894 Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433 |||||||||||| || || |||| Sbjct 2572895 CTTGCCGGTCAAGGTCTTGACGA 2572917 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || |||||| | || || |||||||||||| Sbjct 2573013 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 2573072 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| | |||||||| || ||||| || || || || || || || || ||| Sbjct 2573073 GCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTC 2573132 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || | || | ||||||||| || | || Sbjct 2573133 ACATTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTC 2573192 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 2573193 TTGACGAAGATTTGCAT 2573209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644762526640