Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03]
6 sequences; 38,047,942 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq3 172 5e-38
>seq3
Length=7792947
Score = 172 bits (190), Expect = 5e-38
Identities = 317/462 (69%), Gaps = 2/462 (0%)
Strand=Plus/Plus
Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GATGACGAACAAGGC 93965
|||||||| || || || ||| ||| | || || || ||||| | ||| | ||||
Sbjct 1386577 TTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGAT-ATGAAGGA 1386635
Query 93966 CGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGC 94025
||| ||| || || | ||| | ||||||| ||||| | || || || ||
Sbjct 1386636 GGACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGC 1386695
Query 94026 GGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTAC 94085
|| || || || | | | |||| | ||||||| || || |||||| ||||||
Sbjct 1386696 TGGTGGTATTGGCTTGAACGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTAC 1386755
Query 94086 CAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTA 94145
|||||| || |||||||| |||| || ||||| || || ||||||||| | || || ||
Sbjct 1386756 CAATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTA 1386815
Query 94146 CGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCA 94205
||| |||||||||||| | | | ||| | ||||| |||| || || || |||||
Sbjct 1386816 CGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAACCATGGCA 1386875
Query 94206 CGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGC 94265
||| ||||| | ||| | || || |||||||| ||||| || || || | ||
Sbjct 1386876 CGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGCGC 1386935
Query 94266 CAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAA 94325
| ||||| |||| ||||| ||| | || || ||||| ||||| || ||||||| |||
Sbjct 1386936 TCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGAAA 1386995
Query 94326 CTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367
| || |||| ||| | || || || ||||| || || ||
Sbjct 1386996 CGGCGAATGGACTCTCATGTGCCCTAACGAATGCCCTGGCCT 1387037
Score = 125 bits (138), Expect = 7e-24
Identities = 260/384 (68%), Gaps = 10/384 (3%)
Strand=Plus/Plus
Query 94994 AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAG 95053
|||| ||| | ||||||||| | ||| ||| |||||||| | || | |||||||||
Sbjct 1387652 AGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAAC 1387711
Query 95054 CTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGC 95113
| || || | ||||| | | |||||| | ||| ||||| || || || ||||
Sbjct 1387712 CCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGC 1387771
Query 95114 CCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCA 95173
| || ||| || ||||||| |||||||||||||| | || || || | ||||||||
Sbjct 1387772 CTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAATGCTTTGAGCCTTACACCTCCA 1387831
Query 95174 ACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCT-A 95232
|| | ||| | | || || || || || || |||| || ||||| || || |
Sbjct 1387832 ACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCTGGCTTCTCA 1387891
Query 95233 CGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACC----AACTGCTACG 95288
|| | || || | ||||| | ||| || | ||||||| | ||||
Sbjct 1387892 AGGATCTTGTCGAC-ATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCATTGCT--- 1387947
Query 95289 CGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAA 95348
| ||||| || ||||||||||||| | || || | || |||||||| || |||||
Sbjct 1387948 -GATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGATCAAGGCTCTGTACAA 1388006
Query 95349 GACCGTGTGGGAGATCCCGCAGCG 95372
||| ||||||||||| | |||||
Sbjct 1388007 GACTGTGTGGGAGATTTCTCAGCG 1388030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723162895760
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