Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03]
6 sequences; 38,047,942 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq3 138 1e-27
>seq3
Length=7792947
Score = 138 bits (152), Expect = 1e-27
Identities = 1075/1711 (63%), Gaps = 71/1711 (4%)
Strand=Plus/Minus
Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608
|||| || |||||||||||||| || |||||||| || |||||||| || | |||
Sbjct 1388192 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 1388133
Query 115609 ATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 115668
|| || | |||| | || || | |||| | ||| | | || || |||
Sbjct 1388132 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 1388073
Query 115669 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 115725
|| |||||| || || || || ||||| | |||| ||| || || |||
Sbjct 1388072 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 1388016
Query 115726 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAG 115785
|||||||| |||| || ||| || || | ||||| | ||| || ||||||||
Sbjct 1388015 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 1387956
Query 115786 CC---ACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTG 115842
|| | | || ||| || | | ||||||| | | ||||| ||||| || |
Sbjct 1387955 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 1387899
Query 115843 AGATCCTCCA----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCT 115898
||||||| | | ||| | |||||||| ||||| || || ||| || |
Sbjct 1387898 AGATCCTTGAGAAGCCAGGGG----TTGACAACCTGGAACTCGCCAGCAAGGACTCGGCG 1387843
Query 115899 CAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGT 115958
| |||||||||| ||||| ||||||||||| || ||||| || | || || | ||
Sbjct 1387842 TTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGT 1387783
Query 115959 GGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCG 116018
||| || ||||| || || | ||| || |||||||||| ||| | | |
Sbjct 1387782 ACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATC 1387723
Query 116019 TTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAAC 116076
|| ||||| |||||||| | | | || | || | | |||||| || |||
Sbjct 1387722 CTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAAC 1387665
Query 116077 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 116136
||||| ||||| | || || || || |||| || || || || || || |||
Sbjct 1387664 TGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTG 1387605
Query 116137 GCCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 116195
|| | || | || || ||||| ||||| || || ||||| || || | ||
Sbjct 1387604 GCGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 1387546
Query 116196 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAG 116255
|| | ||||| || ||||| | | ||| || ||| |||| |||||
Sbjct 1387545 CAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAG 1387486
Query 116256 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCAC 116315
|||||| ||||| || ||||| || || || | ||| || || ||||| | ||
Sbjct 1387485 ACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGAC 1387426
Query 116316 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 116375
|| || || ||||| | | | || | ||| | ||||| | |||| ||
Sbjct 1387425 AGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTC 1387366
Query 116376 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGC 116432
|| ||||| | | | || | || || ||||||| ||| | | || || |
Sbjct 1387365 GTGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGA 1387309
Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492
| || || || || || |||| | |||||| | ||| || || || || ||
Sbjct 1387308 CAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGT 1387249
Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTACAC 116550
|||| || || || ||||| || | ||||||||| || ||| ||| | || ||
Sbjct 1387248 GCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTGCAG 1387191
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
||||||||||||||| | || | || ||||| || |||| || ||||| || | |
Sbjct 1387190 TGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTAC 1387131
Query 116611 CATACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTT 116663
|| | | | | | || | | | ||| || |||| |||| |||||||||
Sbjct 1387130 CAAAGTTTCTGAGCCTTGA----TAGACTTG---CGACCCTTACCCTCTCTCTCGTACTT 1387078
Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCT- 116721
| ||| || |||||||| || ||||| ||| || | || || || || || |
Sbjct 1387077 TTCGTACAGAGCCTCAAATTCGTCACCGT-AGCAGTCAGCAAGGCCAGG-GCATTCGTTA 1387020
Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781
|| || | ||||| ||||| || ||| || ||||||||||| || || ||||||
Sbjct 1387019 GGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATC 1386960
Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 116841
|| || || |||| || || ||| ||| | || || | || ||||| || |
Sbjct 1386959 CAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGA 1386900
Query 116842 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC----- 116895
|| | || || | || || |||||||| ||||| ||||| | |||| | ||
Sbjct 1386899 TCAAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGT 1386840
Query 116896 CCCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATT 116955
| |||| |||| |||||| || || | || || ||| || || || |||||
Sbjct 1386839 CGCTTG---TTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATG 1386783
Query 116956 GGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGA 117013
|||| |||||| | || ||||| || || ||| || ||| | |||| | ||
Sbjct 1386782 GGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGA 1386725
Query 117014 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGA 117073
|||| || || |||||||| || ||| ||| || || || || | |||
Sbjct 1386724 TTCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGA 1386665
Query 117074 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 117133
| | ||||||| ||||| || ||| |||| | | | |||||||| || |
Sbjct 1386664 GGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAA 1386605
Query 117134 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT 117193
|| ||| ||| ||||| |||||||| | || || | || || ||| | | |||
Sbjct 1386604 GCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTT 1386547
Query 117194 G--GGACATCTTATCGTAGGTCTCCAAGACA 117222
| ||||| | ||| ||||||||||||
Sbjct 1386546 GCTTGACATGAGGTTGTATGTCTCCAAGACA 1386516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507153986960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |