Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03]
6 sequences; 38,047,942 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq1 343 2e-89
seq4 98.7 1e-15
seq3 91.5 2e-13
>seq1
Length=11760891
Score = 343 bits (380), Expect = 2e-89
Identities = 993/1528 (65%), Gaps = 25/1528 (2%)
Strand=Plus/Plus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| || || || ||||| || ||||| | || ||| || || || || || ||
Sbjct 2730182 TCATCCTCCTCCTTGTACTTCTCAGCATCGTTGAGCATGCGCTCGATCTCCTCCTTGGAC 2730241
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| || || || || ||||| | ||| || || | |||| || |
Sbjct 2730242 AGGCGGCCCTTGTCGTTGGTGATGACGATCTTGTTGGACTTGCCGGTACCCTTCTCGACG 2730301
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
|| || |||| ||||| || ||||| | |||||| | || | ||| || || |
Sbjct 2730302 GCGGAAACGTTCATGATACCGTTGGCATCGAGATCGAAGGTGACCTCAATCTGGGGAACA 2730361
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | || || | || ||||| || | || || | || | | |||| ||| |
Sbjct 2730362 CCACGGGGAGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTG 2730421
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868
| || || ||||| || ||||| | || || |||| || || ||
Sbjct 2730422 GTGCGCTGGCGCTCACCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTGTCGGAGAAG 2730481
Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928
|| ||||||| | ||||| | ||||| || || || | || || | | ||||
Sbjct 2730482 GTAGAGAAGACCTCGGACTTCTTGGTGGGAATGGTGGTGTTGCGGGGGATGAGCTTGGTC 2730541
Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988
|| |||||||| || |||| || ||||| || || | ||||| | ||| | |
Sbjct 2730542 ATCATACCACCAGCGGTCTCGATACCGAGAGAGAGGGGGGCGACGTCGAGGAGCAGAA-- 2730599
Query 6989 TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACCG 7037
||| | || || |||| |||| | | || || || ||||| |
Sbjct 2730600 TCTCG------TTGGTGGCCTTGCTAGAGGTGTCACCAGAGAGAATAGCAGCCTGGACAG 2730653
Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097
|| ||||| || || |||||||| || || || | || || | || || ||||| |
Sbjct 2730654 CGGCACCGTAGGCAACAGCCTCATCAGGATTGATGGACTTGTTGGGCTCCTTTCCGTTGA 2730713
Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157
| || || | | | | || | ||||| || || ||||||||||| | ||||
Sbjct 2730714 AGTAGTCGGTGATGAGCTTCTGGACACGGGGGATACGGGTAGATCCACCGACGAGGACGA 2730773
Query 7158 TTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217
| || | || || || |||||||| | ||| ||| ||||| || | |
Sbjct 2730774 TCTCGTGGACGAGGGACTTGTCGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGGA 2730833
Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277
| ||||| | ||| || || ||||| ||||| |||||||| ||||| || |
Sbjct 2730834 TGGTGGATCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAAGTGT 2730893
Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337
||||||||| || ||| | | || || || ||||||| || || || | ||||| |
Sbjct 2730894 AGAAATCAATACCCTCGAAGAGAGAGTCGATCTCAATGGAGGTCTGAGCGGAAGAAGAGA 2730953
Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG 7397
|||||||| ||||||||||| || ||||| | ||| ||||| ||||| ||| |
Sbjct 2730954 GAGTTCGCTTGGCGCGCTCACAAGCGGTTCGGAGACGTCGAAGAGCACGGACGTTGGTGC 2731013
Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAAT 7457
| ||| |||||||| || || || ||||| | | |||||| || ||| | |
Sbjct 2731014 TTAGATCCTTCTTATGCTTTCGCTTGAACTCGTTAACGAAGTGGTTAACGAGGCGGTTGT 2731073
Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517
|||||||||||||||||||||| || || || || || | ||||| || ||||||||
Sbjct 2731074 CGAAATCTTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCCT 2731133
Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577
| |||||| | | | || ||||| || ||||||||||| || || || ||||| ||||
Sbjct 2731134 CCTCAATGGTAAGGAGAGAGACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGT 2731193
Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637
| || | || ||||| || |||||||| || || || || || || || || |
Sbjct 2731194 TGCGCTCACCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGT 2731253
Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697
| || || || ||| ||| || || || || ||||||| || || || || || |
Sbjct 2731254 TGATGATTCGGAGAACGTTGAGACCGGCGATGAGACCCGCATCCTTGGTAGCCTGACGCT 2731313
Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757
| || ||||| |||||||| ||||| || || || |||| |||| ||| |||||| |
Sbjct 2731314 GAGAGTCGTTGAAGTAGGCAGGGACGGTGACAACGGCGTTGTTGACAGTCTCACCGAGGT 2731373
Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817
| || || || | || ||| ||||| || | ||| | || ||||| || | | |
Sbjct 2731374 AAGACTCAGCAGTCTCACGCATCTTGGTGAGGATCATGGCGGAGATCTCCTCGGGGGTGA 2731433
Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877
| ||| | ||||| || || ||||| || || ||| || |||| | ||
Sbjct 2731434 AGGTCTTCTTCTCACCCTTGAACTCAACCTCGATGGCGGGCTT---GCCAGCCTTGTCGA 2731490
Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937
| | | | | | | ||||||||| | ||||||| || | ||||| | |
Sbjct 2731491 TGATTGTGAAGGGGAAGTGCTTCATATCGGCCTGGACCTCAGCATCGGCGAACTTGCGGC 2731550
Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997
|||| | ||||| || || || || ||||| | |||||||||||| |||||||| |
Sbjct 2731551 CGATCAATCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTGG 2731610
Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057
| || || || || ||||| || | || || || ||||| | || ||||| ||||
Sbjct 2731611 CGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTTC 2731667
Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTC 8085
| || || |||||||| || || || ||
Sbjct 2731668 GGTTACCCTGGTCGTTGGCGATGATATC 2731695
>seq4
Length=9395062
Score = 98.7 bits (108), Expect = 1e-15
Identities = 170/244 (70%), Gaps = 5/244 (2%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||| | ||| || || || ||||| || || || ||||| ||
Sbjct 6402556 ATCGAAATCCTCACCACCAAGGTGGGTGTCACCAGCGGTAGCGAGAACCTCGAAGATGCC 6402615
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
| |||||| | || |||||||| || ||||||||||| || || | || |
Sbjct 6402616 ATCGTCAATGGAGAGCAGAGAAACATCGAAGGTACCACCACCGAGATCGTA---GACAAT 6402672
Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
| || | || ||| | | |||||| || |||||||| |||||||| || || || || |
Sbjct 6402673 GATC-TGGCGCTCGCCATCGTTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTAGGCT 6402731
Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
| || | ||| || || ||| || || ||||| | | || || || || || ||||
Sbjct 6402732 CGTTGACAATTCGGAGGACGTTGAGACCGGCAATGATACCGGCGTCCTTGGTGGCCTGTC 6402791
Query 7695 GTTG 7698
| ||
Sbjct 6402792 GCTG 6402795
>seq3
Length=7792947
Score = 91.5 bits (100), Expect = 2e-13
Identities = 226/339 (67%), Gaps = 12/339 (4%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
|||||||||||||||||| | || ||||| || ||| | ||||| || || | |||
Sbjct 4481723 ATCGAAATCTTCACCACCGAGATGGGTATCACCGTTGGTGGACTTGACCTCGAAAACACC 4481664
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
| || | | | || | ||| || ||||||||||| || || | | ||
Sbjct 4481663 GTTCTGGATCTCAAGGATGGAGATATCGAAGGTACCACCACCAAGATCGTAGACAGCGAC 4481604
Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
| | || | || ||| ||||||||||| || | ||| || || || || ||
Sbjct 4481603 AATGCTGTCAGCCTC------CTTCTCGAGACCGTAGGCAAGAGCGGCGGCAGTAGGCTC 4481550
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCT-TG 7692
|| | | ||| || ||| ||||| ||||| ||| | || || || || ||| ||
Sbjct 4481549 GTTGACGACACGGAGGACGTTGAGGCCGGCAAT--TTGACCAGCGTCCTTGGT-GCTCTG 4481493
Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752
||| || || ||||| |||||||| ||||| || ||||| |||| | ||| ||||
Sbjct 4481492 TCGCTGAGAGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTTCTTGATAGGCTTAGA 4481433
Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791
||| |||| || ||| | || ||||| ||| | || ||
Sbjct 4481432 GAGGTACGCCTCGGCGGTCTCCTTCATCTTGTTGAGGAC 4481394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132752365040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |