Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03]
6 sequences; 38,047,942 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq3 205 1e-47
>seq3
Length=7792947
Score = 205 bits (226), Expect = 1e-47
Identities = 1099/1736 (63%), Gaps = 45/1736 (3%)
Strand=Plus/Minus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
||||| |||||||| || |||||||| || | ||||| | | ||||| | |
Sbjct 1388183 CGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 1388124
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709
| |||| ||| || || | |||| || || | | ||| ||| |||||||||
Sbjct 1388123 ATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAG 1388064
Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTG 105766
|||||| | || ||||| | | || ||| || || |||||||| ||
Sbjct 1388063 GCACCACGGTCAGCAGCCATCTGCA---CAACCTGTCGCTGAGAAATCTCCCACACAGTC 1388007
Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCC---CC 105823
||| ||| |||||| || | ||||| | | ||| || || || ||||| |
Sbjct 1388006 TTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCA 1387947
Query 105824 GCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTG 105883
|| ||| || | | ||||||| | | |||||||||||| || | ||||| |||
Sbjct 1387946 GCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTG 1387890
Query 105884 ACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTC 105943
| || |||||||| | ||||| || || ||| || | | ||||||||
Sbjct 1387889 AGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTG 1387830
Query 105944 GTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGC 106003
| ||||| || ||||||||||| || || || | || || | ||| ||| || |||
Sbjct 1387829 GAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGC 1387770
Query 106004 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA 106063
|| || || | | |||||||| || | ||| | ||||| || |||
Sbjct 1387769 ATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGT 1387710
Query 106064 TCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121
|||||||| | | | || || || || |||| |||| || || || || | || |
Sbjct 1387709 TCCCAGTCCCAAAGGTCAGAG-GGCTTGACATTCC-ACATGTCGAACTGGAGAATACCCT 1387652
Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAG 106180
|| | || || |||| || || |||| ||||| | | || | || |||||
Sbjct 1387651 CAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTTGCACAG 1387592
Query 106181 CTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCT 106240
|| |||| ||||| || ||||| || ||||| | |||| ||| ||
Sbjct 1387591 A-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCC 1387533
Query 106241 TCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 106300
||| || ||||| | |||| || ||| |||| ||||||||||| |||||
Sbjct 1387532 TCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCACACCA 1387473
Query 106301 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTT 106360
| |||||| |||| ||| ||||| || || || || | || || || ||
Sbjct 1387472 AGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTG 1387413
Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420
||| |||| ||| | ||| | ||||| | |||| || || || || |
Sbjct 1387412 ACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCTTCTTG 1387353
Query 106421 TAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAA 106477
| || | || || ||||||| ||| | | || || | | || || |
Sbjct 1387352 AAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGACAAGGAGGCAAGG 1387296
Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537
||||||||||| |||||| | ||| || | || || || |||| ||||||
Sbjct 1387295 TTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAG 1387236
Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597
|| || || || | ||||||||||||||||| ||||| |||||||||||||
Sbjct 1387235 CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGC 1387176
Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACAT-CGGCGGC 106656
||| | || | || ||||| ||||| | || ||||| || | ||| | | | | | |
Sbjct 1387175 ATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCC 1387116
Query 106657 TGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714
| | || | | ||| ||| | ||||| |||||||||| ||| || || |||||
Sbjct 1387115 TTGATAGACTTGCGA---CCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAAT 1387059
Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTG 106773
|| ||||| ||| | || || || || || || || || | |||| |||||
Sbjct 1387058 TCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGGCACATGAGAGTCCATTC 1387000
Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833
|| ||| || |||||||||||||| || || ||||| || | | | || || ||
Sbjct 1386999 GCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTC 1386940
Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893
| | || |||| || | ||| || || ||| | ||||||||||| | || ||
Sbjct 1386939 ACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTC 1386880
Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTG 106947
||||||||||| ||||| |||| |||| || || ||| | ||| | ||
Sbjct 1386879 GGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTA---CCACCCTG 1386823
Query 106948 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 107007
| || || || || ||| ||| || || || ||||| |||| ||||| | ||
Sbjct 1386822 GTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGT 1386763
Query 107008 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAAT 107067
|||||| || || || ||| | |||| | | ||| || || |||||
Sbjct 1386762 ACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAAT 1386703
Query 107068 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 107127
||| |||||| ||| || || ||||| | | || || | |||||||| | ||
Sbjct 1386702 ACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAAT 1386643
Query 107128 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 107187
||||||||| | | | ||||||||| || | ||| || ||| ||||| ||
Sbjct 1386642 GCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGC 1386583
Query 107188 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTC 107245
||||| | || || |||| ||| ||| | | |||| ||||| || |||||||
Sbjct 1386582 GTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTGACATGAGGTTGTATGTC 1386525
Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301
||||||||| ||||| || || || ||| || | || || ||||| | |||
Sbjct 1386524 TCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGATCAT 1386469
Score = 107 bits (118), Expect = 2e-18
Identities = 305/460 (66%), Gaps = 24/460 (5%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| |||| |||||||| |||||||||||||| || ||||| ||||| |||||
Sbjct 2175460 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 2175519
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099
||||| || || || | | || | | | | || | | |||| ||||
Sbjct 2175520 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCAAC------GAGG 2175573
Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159
|||||||| | || | || ||||||| ||| | |||||||| |||| ||
Sbjct 2175574 AGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGG 2175633
Query 117160 TTACATGGGAGTGCGTCC--AAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGA 117217
||| ||||| || || |||| ||| | | |||||| ||| || || | | |
Sbjct 2175634 GCACAAGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATAA 2175691
Query 117218 TGGCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGG 117274
|| | ||||| | | | ||| ||| || | || | || ||| || ||
Sbjct 2175692 TGTCCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GG 2175748
Query 117275 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTG 117334
|||| || ||| ||||||||||| || ||||| || || || || |||| || || |
Sbjct 2175749 CAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCAG 2175808
Query 117335 GCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATA 117393
||||||| || |||||||| | ||| | || | ||| || | ||| ||||||||||
Sbjct 2175809 GCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATA 2175867
Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433
||||| || ||||| |||| ||| |||| |||||||
Sbjct 2175868 CCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGG 2175907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980755751440
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