Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03] 6 sequences; 38,047,942 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=8997558 Score = 107 bits (118), Expect = 2e-18 Identities = 263/394 (67%), Gaps = 5/394 (1%) Strand=Plus/Minus Query 159386 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGG 159445 |||| || || |||| || | || || || || || || ||||| || || | |||| Sbjct 1124348 GAAAGGTTTGCCTGATCCCCGTTTCTGCCCACGGTACCAACCCTGCCTCGGCCGCTATGG 1124289 Query 159446 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGA-TGGCAACATAGACATCAAAG 159502 | || ||||| || || ||||||||||| | | || ||| ||| | ||||| | | Sbjct 1124288 CTGGCATGAAGGTCGTCACCGTCAAGTGTGACGGCAAGACTGGTAACCTGGACATTGAGG 1124229 Query 159503 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATC 159562 |||| || || ||| | | | ||| || | ||| ||| |||| || | Sbjct 1124228 ATCTCAAGGCCAAGTGTGTCAAGCACGCTGATGAGCTCGCTGCTATCATGGTTACCTACC 1124169 Query 159563 CATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGA 159622 | || || |||||| ||||| | | || | || | || | ||||||| ||| Sbjct 1124168 CCTCCACCTTTGGTGTCTTTGAGCCCGAGATTAAGCAAGTCTGCGATCTTGTTCACGAGC 1124109 Query 159623 ATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAAC 159682 | ||||||| || || | || ||||| || | || || ||| | ||||| | Sbjct 1124108 ACGGTGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATCGGTCTTTGCTCTC 1124049 Query 159683 CATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCA 159741 | |||| ||| || || ||||| || ||||| ||| | || ||||| ||||||||||| Sbjct 1124048 CTGGTGA-TATCGGCGCTGATGTCTGCCATCTTAACCTCCACAAGACCTTCTGTATTCCC 1123990 Query 159742 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775 || || ||||| || ||||| || |||||||||| Sbjct 1123989 CACGGTGGTGGTGGCCCTGGTGTCGGTCCTATTG 1123956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051155896160