Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03] 6 sequences; 38,047,942 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3 179 4e-40 seq2 120 3e-22 seq1 107 2e-18 >seq3 Length=7792947 Score = 179 bits (198), Expect = 4e-40 Identities = 1117/1762 (63%), Gaps = 69/1762 (4%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTT 148109 ||||| ||| |||||||| || ||||||||||| ||||| | ||| |||||| Sbjct 1388084 GACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTCGCTGA 1388025 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 |||||||| | ||||||||||| |||||| | | || ||| | |||| Sbjct 1388024 GAA---ATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATG 1387968 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | || ||| | |||| || | || ||| | || | | || Sbjct 1387967 TTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCC 1387908 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | |||| || || | || || | | || || ||||| |||||||| || || || Sbjct 1387907 ATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACT 1387848 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || | || | |||| || | || ||||| | ||||||||||| | ||||||| Sbjct 1387847 CGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGC 1387788 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | ||| | || || ||||| || || ||||| |||||| | |||| || | || Sbjct 1387787 GAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTG 1387728 Query 148410 ATTTTGCGCTTCAGAGCCG--CCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGT 148467 | | | || ||| | |||||||||| || || || | || |||||||||| Sbjct 1387727 ACAT--CCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATTCCACATGT 1387670 Query 148468 CGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527 || |||| ||||| || || ||| ||||| | | | | ||| || || | | Sbjct 1387669 CGAACTGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCT 1387610 Query 148528 CCGCCGCCAGTT-CGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGC 148586 || || |||| | ||| || || || ||| ||| || |||||| |||||| Sbjct 1387609 CCTTGGCGAGTTGCACAG-ACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGC 1387551 Query 148587 CTGTTGAGC---AGCGCCGC-CGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGC 148642 |||| ||| | ||| | || | || | ||||| || || | ||| || Sbjct 1387550 TTGTTCAGCTCACGAGCCTCAGGAGAC----TCAAAGGGCATGCGGAGGGCAAGAAAGGC 1387495 Query 148643 GTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGC 148702 || || || || || || || | |||||||| ||||| |||||| | || || Sbjct 1387494 ATCAGCGAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGC 1387435 Query 148703 GCTC-TCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCT 148761 ||| | || || ||||||||| |||||||||||||| | |||||| || || || | Sbjct 1387434 -CTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTT 1387376 Query 148762 TTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTAC------GATGCATCGGT 148815 || | | ||||| | || ||||| ||||| | ||| | | Sbjct 1387375 GAGTGACCTCGTGCAGCTTCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATAAAAGAGG 1387316 Query 148816 TCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGA 148875 || | | ||||| || ||||| || || |||||| ||||||| ||| || | || Sbjct 1387315 GCAGAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGA 1387256 Query 148876 TCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGT 148935 |||| | |||||| ||| || | ||| || | ||||||||| || ||||||| | Sbjct 1387255 TCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGAT 1387196 Query 148936 TGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT-- 148993 |||| |||||||| |||||| | || || || || ||| | || | || Sbjct 1387195 TGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGG 1387136 Query 148994 -GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT---CCT---GCT 149046 | ||| | || | ||| || |||| | | | |||||||| ||| || Sbjct 1387135 CGTACCAA---AGTTTCTGAGC-----CTTGATAGAC-TTGCGACCCTTACCCTCTCTCT 1387085 Query 149047 CGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCA 149104 |||| | ||| | ||| ||| || | || |||||||| || | || || ||||| Sbjct 1387084 CGTACTTTTCGTACAGAGC--CTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCA 1387027 Query 149105 CTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATC 149164 | || ||||||||||| | ||| |||||| | || |||||||| || ||||| Sbjct 1387026 TTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATC 1386967 Query 149165 GGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGC--GCCCATG-TT 149221 || | ||| || || | | ||||| || || || | | || | || || || Sbjct 1386966 AGGGATCCAAAGAGCTAAGAACAGGTCACGAGC---GCGGACCTCCTCCTTACCGTGATT 1386910 Query 149222 GCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAG 149281 || || | || | ||| | ||| |||||||| || |||| ||| | |||| Sbjct 1386909 CTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAA 1386850 Query 149282 CGCGCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCG 149338 || || |||||| || |||||||| |||| || | ||||||| ||||| || Sbjct 1386849 GGCACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACG 1386790 Query 149339 AACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGC 149398 | ||| || | || || ||| ||| || || ||| | ||| | ||| || Sbjct 1386789 CAGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGC 1386730 Query 149399 TCGCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AG 149456 || | | ||| |||| | ||| || || || ||| | ||| || || || | || Sbjct 1386729 ACGGATTCGGTGGGCGTTCAAGCCAATACCACCAGCCAT-CTTGGAAATCATGGCACAAG 1386671 Query 149457 TCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGC-AGAAAGCA 149515 || ||| || |||||| || || |||||||| |||||| ||| | || ||||| Sbjct 1386670 TC-TTGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCAT-ATCAACAAGGAAGCA 1386613 Query 149516 CGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AA 149574 || | | || || | || ||||| ||| | |||||||| || || || || Sbjct 1386612 TGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAA 1386553 Query 149575 AATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGA 149634 | || || | ||| | | ||| | ||| | || || || || || || || || Sbjct 1386552 GAACTTGCTTG-ACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGA 1386494 Query 149635 TGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTT 149694 | || | ||||| ||||| | |||||||||||| ||||| || | |||| |||| | Sbjct 1386493 TTCCAACAGCGACTCGCATGATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCT 1386434 Query 149695 TGAGCAAGTA-GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGG 149753 |||||||| | | | || || | ||||||| || ||||||| |||||||| Sbjct 1386433 GTAGCAAGTATGATCTGGACAAG-GTTCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGA 1386375 Query 149754 CCGTGGTCAATGGCGGCGTCGA 149775 | | | |||| || | ||||| Sbjct 1386374 TCATAGACAATCGCTGAGTCGA 1386353 Score = 134 bits (148), Expect = 1e-26 Identities = 156/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| ||||| || ||||| |||| || ||| | | | |||||||| Sbjct 6169743 AAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAG 6169801 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | || || ||||||||||| || ||||| || |||||||| ||| Sbjct 6169802 CTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGAT 6169861 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| ||||||| | |||||| || | ||||| || || || Sbjct 6169862 CTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCC 6169921 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || ||||||||||||||| Sbjct 6169922 CGTGAGGGTCTTGACGAAAATCTGCATG 6169949 >seq2 Length=8997558 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | ||| | | | ||||||||||||||||| Sbjct 2573013 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 2573071 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | |||||||| || ||||||||||| |||||||| |||||| ||| Sbjct 2573072 GGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 2573131 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| | ||| || |||| ||||| ||| ||||| || || || Sbjct 2573132 CACATTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGT 2573191 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 2573192 CTTGACGAAGATTTGCAT 2573209 Score = 120 bits (132), Expect = 3e-22 Identities = 148/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | ||| | | | ||||||||||||||||| Sbjct 2573241 GTCGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 2573299 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | |||||||| || ||||||||||| |||||||| ||||| ||| Sbjct 2573300 GGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTT 2573359 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || || | | ||| || |||| ||| | || |||||||||| || Sbjct 2573360 GACGTTGTCGATAGTATCAGATGACTCAACCTCGAGGGTAATAGTCTTGCCGGTCAAGGT 2573419 Query 133643 TTTTACGAAAATCTGCATGG 133662 || ||||| |||||||||| Sbjct 2573420 CTTGACGAAGATCTGCATGG 2573439 Score = 109 bits (120), Expect = 5e-19 Identities = 139/189 (74%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| || || ||||| || ||||| ||| | || ||| ||||||||||||||||| Sbjct 2572730 GGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACC-GTCCTCGAGCTGCTTGC 2572788 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| | |||||||| || |||||||| || |||||||| |||||| || Sbjct 2572789 CGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACT 2572848 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | ||| || || | ||||| ||| |||||||||| | Sbjct 2572849 TGACGTTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGG 2572908 Query 133642 TTTTTACGA 133650 | || |||| Sbjct 2572909 TCTTGACGA 2572917 >seq1 Length=11760891 Score = 107 bits (118), Expect = 2e-18 Identities = 119/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| ||| | || | |||||||| || || |||||||| |||||| Sbjct 6455741 TCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTG 6455682 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | | ||| || |||| ||||| | Sbjct 6455681 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATG 6455622 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATGGC 133663 || ||||| ||||| || || |||||| ||| ||||| Sbjct 6455621 GTCTTGCCCGTCAGGGTCTTCACGAAA--CTGGATGGC 6455586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420763743440