Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03]
6 sequences; 38,047,942 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 179 4e-40
seq2 120 3e-22
seq1 107 2e-18
>seq3
Length=7792947
Score = 179 bits (198), Expect = 4e-40
Identities = 1117/1762 (63%), Gaps = 69/1762 (4%)
Strand=Plus/Minus
Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTT 148109
||||| ||| |||||||| || ||||||||||| ||||| | ||| ||||||
Sbjct 1388084 GACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTCGCTGA 1388025
Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169
|||||||| | ||||||||||| |||||| | | || ||| | ||||
Sbjct 1388024 GAA---ATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATG 1387968
Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229
||| | || ||| | |||| || | || ||| | || | | ||
Sbjct 1387967 TTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCC 1387908
Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289
| |||| || || | || || | | || || ||||| |||||||| || || ||
Sbjct 1387907 ATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACT 1387848
Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349
|| || | || | |||| || | || ||||| | ||||||||||| | |||||||
Sbjct 1387847 CGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGC 1387788
Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409
| ||| | || || ||||| || || ||||| |||||| | |||| || | ||
Sbjct 1387787 GAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTG 1387728
Query 148410 ATTTTGCGCTTCAGAGCCG--CCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGT 148467
| | | || ||| | |||||||||| || || || | || ||||||||||
Sbjct 1387727 ACAT--CCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATTCCACATGT 1387670
Query 148468 CGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527
|| |||| ||||| || || ||| ||||| | | | | ||| || || | |
Sbjct 1387669 CGAACTGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCT 1387610
Query 148528 CCGCCGCCAGTT-CGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGC 148586
|| || |||| | ||| || || || ||| ||| || |||||| ||||||
Sbjct 1387609 CCTTGGCGAGTTGCACAG-ACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGC 1387551
Query 148587 CTGTTGAGC---AGCGCCGC-CGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGC 148642
|||| ||| | ||| | || | || | ||||| || || | ||| ||
Sbjct 1387550 TTGTTCAGCTCACGAGCCTCAGGAGAC----TCAAAGGGCATGCGGAGGGCAAGAAAGGC 1387495
Query 148643 GTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGC 148702
|| || || || || || || | |||||||| ||||| |||||| | || ||
Sbjct 1387494 ATCAGCGAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGC 1387435
Query 148703 GCTC-TCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCT 148761
||| | || || ||||||||| |||||||||||||| | |||||| || || || |
Sbjct 1387434 -CTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTT 1387376
Query 148762 TTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTAC------GATGCATCGGT 148815
|| | | ||||| | || ||||| ||||| | ||| | |
Sbjct 1387375 GAGTGACCTCGTGCAGCTTCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATAAAAGAGG 1387316
Query 148816 TCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGA 148875
|| | | ||||| || ||||| || || |||||| ||||||| ||| || | ||
Sbjct 1387315 GCAGAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGA 1387256
Query 148876 TCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGT 148935
|||| | |||||| ||| || | ||| || | ||||||||| || ||||||| |
Sbjct 1387255 TCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGAT 1387196
Query 148936 TGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT-- 148993
|||| |||||||| |||||| | || || || || ||| | || | ||
Sbjct 1387195 TGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGG 1387136
Query 148994 -GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT---CCT---GCT 149046
| ||| | || | ||| || |||| | | | |||||||| ||| ||
Sbjct 1387135 CGTACCAA---AGTTTCTGAGC-----CTTGATAGAC-TTGCGACCCTTACCCTCTCTCT 1387085
Query 149047 CGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCA 149104
|||| | ||| | ||| ||| || | || |||||||| || | || || |||||
Sbjct 1387084 CGTACTTTTCGTACAGAGC--CTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCA 1387027
Query 149105 CTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATC 149164
| || ||||||||||| | ||| |||||| | || |||||||| || |||||
Sbjct 1387026 TTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATC 1386967
Query 149165 GGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGC--GCCCATG-TT 149221
|| | ||| || || | | ||||| || || || | | || | || || ||
Sbjct 1386966 AGGGATCCAAAGAGCTAAGAACAGGTCACGAGC---GCGGACCTCCTCCTTACCGTGATT 1386910
Query 149222 GCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAG 149281
|| || | || | ||| | ||| |||||||| || |||| ||| | ||||
Sbjct 1386909 CTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAA 1386850
Query 149282 CGCGCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCG 149338
|| || |||||| || |||||||| |||| || | ||||||| ||||| ||
Sbjct 1386849 GGCACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACG 1386790
Query 149339 AACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGC 149398
| ||| || | || || ||| ||| || || ||| | ||| | ||| ||
Sbjct 1386789 CAGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGC 1386730
Query 149399 TCGCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AG 149456
|| | | ||| |||| | ||| || || || ||| | ||| || || || | ||
Sbjct 1386729 ACGGATTCGGTGGGCGTTCAAGCCAATACCACCAGCCAT-CTTGGAAATCATGGCACAAG 1386671
Query 149457 TCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGC-AGAAAGCA 149515
|| ||| || |||||| || || |||||||| |||||| ||| | || |||||
Sbjct 1386670 TC-TTGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCAT-ATCAACAAGGAAGCA 1386613
Query 149516 CGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AA 149574
|| | | || || | || ||||| ||| | |||||||| || || || ||
Sbjct 1386612 TGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAA 1386553
Query 149575 AATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGA 149634
| || || | ||| | | ||| | ||| | || || || || || || || ||
Sbjct 1386552 GAACTTGCTTG-ACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGA 1386494
Query 149635 TGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTT 149694
| || | ||||| ||||| | |||||||||||| ||||| || | |||| |||| |
Sbjct 1386493 TTCCAACAGCGACTCGCATGATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCT 1386434
Query 149695 TGAGCAAGTA-GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGG 149753
|||||||| | | | || || | ||||||| || ||||||| ||||||||
Sbjct 1386433 GTAGCAAGTATGATCTGGACAAG-GTTCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGA 1386375
Query 149754 CCGTGGTCAATGGCGGCGTCGA 149775
| | | |||| || | |||||
Sbjct 1386374 TCATAGACAATCGCTGAGTCGA 1386353
Score = 134 bits (148), Expect = 1e-26
Identities = 156/208 (75%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||| ||||| || ||||| |||| || ||| | | | ||||||||
Sbjct 6169743 AAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAG 6169801
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || | || || ||||||||||| || ||||| || |||||||| |||
Sbjct 6169802 CTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGAT 6169861
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | |||| ||||||| | |||||| || | ||||| || || ||
Sbjct 6169862 CTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCC 6169921
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661
|| || || || |||||||||||||||
Sbjct 6169922 CGTGAGGGTCTTGACGAAAATCTGCATG 6169949
>seq2
Length=8997558
Score = 120 bits (132), Expect = 3e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| | ||| | | | |||||||||||||||||
Sbjct 2573013 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 2573071
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | |||||||| || ||||||||||| |||||||| |||||| |||
Sbjct 2573072 GGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 2573131
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||||| | ||| || |||| ||||| ||| ||||| || || ||
Sbjct 2573132 CACATTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGT 2573191
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| || |||||
Sbjct 2573192 CTTGACGAAGATTTGCAT 2573209
Score = 120 bits (132), Expect = 3e-22
Identities = 148/200 (74%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||||||| | ||| | | | |||||||||||||||||
Sbjct 2573241 GTCGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 2573299
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | |||||||| || ||||||||||| |||||||| ||||| |||
Sbjct 2573300 GGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTT 2573359
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | || || | | ||| || |||| ||| | || |||||||||| ||
Sbjct 2573360 GACGTTGTCGATAGTATCAGATGACTCAACCTCGAGGGTAATAGTCTTGCCGGTCAAGGT 2573419
Query 133643 TTTTACGAAAATCTGCATGG 133662
|| ||||| ||||||||||
Sbjct 2573420 CTTGACGAAGATCTGCATGG 2573439
Score = 109 bits (120), Expect = 5e-19
Identities = 139/189 (74%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| || || ||||| || ||||| ||| | || ||| |||||||||||||||||
Sbjct 2572730 GGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACC-GTCCTCGAGCTGCTTGC 2572788
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| |||| | |||||||| || |||||||| || |||||||| |||||| ||
Sbjct 2572789 CGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACT 2572848
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||||| | ||| || || | ||||| ||| |||||||||| |
Sbjct 2572849 TGACGTTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGG 2572908
Query 133642 TTTTTACGA 133650
| || ||||
Sbjct 2572909 TCTTGACGA 2572917
>seq1
Length=11760891
Score = 107 bits (118), Expect = 2e-18
Identities = 119/158 (75%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||||||||||||||| ||| | || | |||||||| || || |||||||| ||||||
Sbjct 6455741 TCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTG 6455682
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||||| | | ||| || |||| ||||| |
Sbjct 6455681 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATG 6455622
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATGGC 133663
|| ||||| ||||| || || |||||| ||| |||||
Sbjct 6455621 GTCTTGCCCGTCAGGGTCTTCACGAAA--CTGGATGGC 6455586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420763743440
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