Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03]
6 sequences; 38,047,942 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq3 223 4e-53
>seq3
Length=7792947
Score = 223 bits (246), Expect = 4e-53
Identities = 1010/1583 (64%), Gaps = 41/1583 (3%)
Strand=Plus/Minus
Query 110524 AATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTG 110583
||| ||||| || || || ||| |||||| || | ||||| | | ||| |||||
Sbjct 1388022 AATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTG 1387963
Query 110584 GATGGAACCCCCCGCCTTCACCA----TGAGATCCTTCATATCCTTGGACCAGAGACCAA 110639
||| ||||| | ||| || || | | ||||||| | | |||||| ||||| |
Sbjct 1387962 GATAGAACC----GTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCA 1387907
Query 110640 TCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTC 110699
| | || || |||| || |||||||| ||||| || || ||| ||
Sbjct 1387906 TGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTC 1387847
Query 110700 TTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTG 110759
| |||||||||| | ||||| || ||||||||||| || || || | || || |
Sbjct 1387846 GGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCG 1387787
Query 110760 CGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGA 110819
||| ||| || ||||| || || | | |||||||| || | ||| | |||||
Sbjct 1387786 AGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGA 1387727
Query 110820 TGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTC 110877
|| ||| |||||||| | | | || || || || |||| |||||||
Sbjct 1387726 CATCCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG-GGCTTGACATTCC-ACATGTC 1387669
Query 110878 AAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGC 110937
||||| || | || | || || || || |||| ||||| |||| ||||| |
Sbjct 1387668 GAACTGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTC 1387609
Query 110938 TTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 110996
| || | || ||||| || |||| ||||| || ||||| || ||||| |
Sbjct 1387608 CTTGGCGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCT 1387550
Query 110997 CATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 111056
|||| ||| || ||| || ||||| | |||| || ||| |||| |
Sbjct 1387549 TGTTCAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAG 1387490
Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116
|||||||||| ||||| | |||||| |||| ||| ||||| || || || || |
Sbjct 1387489 CGAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTT 1387430
Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
|| || || || ||| |||| ||| | ||| | ||||| | ||||
Sbjct 1387429 GGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGA 1387370
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAA 111233
|| || || || | | || | || || ||||||| ||| | | || |
Sbjct 1387369 CCTCGTGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCA 1387313
Query 111234 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 111293
| | | || || | ||||||||||| |||||| | ||| || | || |
Sbjct 1387312 GAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCT 1387253
Query 111294 CTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGC 111353
| || || | |||||| || || || || | ||||||||||||||||| ||||
Sbjct 1387252 CAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGC 1387193
Query 111354 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCT 111413
| |||||||||||||||| | || | || ||||| ||||| | | ||||| || |
Sbjct 1387192 AGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGT 1387133
Query 111414 TCCAAACAT-CGGCGGCTGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTG 111470
||||| | | | | || | || | | ||| ||| | ||||| ||||||||||
Sbjct 1387132 ACCAAAGTTTCTGAGCCTTGATAGACTTGCGA---CCCTTACCCTCTCTCTCGTACTTTT 1387076
Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGA 111529
||| || || ||||| || ||||| ||| | || || || || || || ||
Sbjct 1387075 CGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGG 1387017
Query 111530 CAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589
|| | |||| ||||| || | ||| || |||||||||||||| || || |||||
Sbjct 1387016 CACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAA 1386957
Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649
|| | | | || || || | | || |||| || | ||| || || ||| | |||
Sbjct 1386956 AGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCA 1386897
Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCC 111703
|||||||| | || || ||||||||||| ||||| |||| |||| || || |
Sbjct 1386896 AGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGC 1386837
Query 111704 TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763
|| | ||| | || | || || || || ||| ||| || || || ||||| |||
Sbjct 1386836 TTGTTA---CCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGA 1386780
Query 111764 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCA 111823
| ||||| | || |||||| || || || ||| | |||| | |
Sbjct 1386779 ACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGG 1386720
Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 111883
||| || || |||||||| |||||| ||| || || ||||| | | || ||
Sbjct 1386719 TGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTA 1386660
Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943
| |||||||| | || ||||||||| | | | ||||||||| || | |||
Sbjct 1386659 TCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGA 1386600
Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GG 112001
|| ||| ||||| || ||||| | || || |||| ||| ||| | | |||| |
Sbjct 1386599 GGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTG 1386542
Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061
|||| || |||||||||||||||| ||||| || || || ||| || | ||||
Sbjct 1386541 ACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGA 1386482
Query 112062 CCCGCATGAACATGTACTGTGGG 112084
| ||||||| ||| | ||| |||
Sbjct 1386481 CTCGCATGATCATATGCTGCGGG 1386459
Score = 109 bits (120), Expect = 7e-19
Identities = 335/507 (66%), Gaps = 26/507 (5%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| | || |||||||| |||||||||||||| || ||||| ||||| |||||
Sbjct 2175460 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 2175519
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 122484
||||| || || || | | || | | | | || | | |||| ||||
Sbjct 2175520 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCAAC------GAGG 2175573
Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544
|||||||| | || | || ||||||| ||| | |||||||| |||| |||
Sbjct 2175574 AGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGG 2175633
Query 122545 TTACATGGGAGTGCGTCC--AAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGA 122602
||| ||||| || || |||| ||| | | |||||| ||| || || | | |
Sbjct 2175634 GCACAAGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATAA 2175691
Query 122603 TGGCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGG 122659
|| | ||||| | | | ||| ||| || | || | || ||| || ||
Sbjct 2175692 TGTCCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GG 2175748
Query 122660 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTG 122719
|||| || ||| ||||||||||| || ||||| || || || || |||| ||||| |
Sbjct 2175749 CAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCAG 2175808
Query 122720 GCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATA 122778
||||||| || |||||||| | ||| | || | ||| || | ||| ||||||||||
Sbjct 2175809 GCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATA 2175867
Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTGCATCAAA 122837
||||| || ||||| |||| ||| || | ||||||| || | ||| | | |
Sbjct 2175868 CCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGGTAGAG-TTCTTATCCTGGAT 2175926
Query 122838 CCATTTCATTGCCCATTTCGCCTTCTT 122864
|||| || ||||| | |||||||||
Sbjct 2175927 CCATCGGATGGCCCAATCCGCCTTCTT 2175953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031952897600
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