Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03]
6 sequences; 38,047,942 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq3 174 2e-38
>seq3
Length=7792947
Score = 174 bits (192), Expect = 2e-38
Identities = 1075/1703 (63%), Gaps = 57/1703 (3%)
Strand=Plus/Minus
Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887
|||| || |||||||||||||| || |||||||| || |||||||| || | |||
Sbjct 1388192 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 1388133
Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947
|| || | |||| | ||| || | |||| | ||| | | || || |||
Sbjct 1388132 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 1388073
Query 117948 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 118004
|| |||||| || || || || ||||| | |||| ||| || || |||
Sbjct 1388072 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 1388016
Query 118005 CACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAT 118064
||||||||| |||| || ||| || || | ||||| | ||| || ||||| ||
Sbjct 1388015 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 1387956
Query 118065 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 118121
|| | | || ||| || | | ||||||| | | ||||| ||||| || |
Sbjct 1387955 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 1387899
Query 118122 AGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 118178
||||||| |||| || |||||||| ||||| || || ||| || |
Sbjct 1387898 AGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGT 1387842
Query 118179 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTG 118238
| ||||| |||| ||||| ||||||||||| || ||||| || | || || | ||
Sbjct 1387841 TGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTA 1387782
Query 118239 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 118298
||| || ||||| || || | ||| || ||||| |||| ||| | | | |
Sbjct 1387781 CTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCC 1387722
Query 118299 TCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 118356
|| ||| | |||||||| | | | || | || | | |||||| || ||||
Sbjct 1387721 TCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAACT 1387664
Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416
|||| ||||| | || || || || |||| || || || || || || ||| |
Sbjct 1387663 GGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGG 1387604
Query 118417 CCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475
| | || | || || ||||| ||||| || || || || || || | |||
Sbjct 1387603 CGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 1387545
Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535
| | ||||| || ||||| | | ||| || ||| |||| ||||||
Sbjct 1387544 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGA 1387485
Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG 118595
||||| ||||| || ||||| || || || | ||| || || ||||| | ||
Sbjct 1387484 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACA 1387425
Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655
|| || || ||||| | | | || | ||| | ||||| | |||| ||
Sbjct 1387424 GGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCG 1387365
Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCG 118712
|| ||||| | | | || | || || ||||||| ||| | | || || |
Sbjct 1387364 TGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGAC 1387308
Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772
| || || || || || |||| | |||||| | ||| || || || || |||
Sbjct 1387307 AAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTG 1387248
Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTACACG 118830
|||| ||| || || ||||| || | ||||||||| || ||| ||| | || ||
Sbjct 1387247 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTGCAGT 1387190
Query 118831 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 118890
||||||||| |||||| | || | || ||||| || |||| || ||||| || | ||
Sbjct 1387189 GATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACC 1387130
Query 118891 AGACATCGGCAGC--TGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948
| | | ||| || | | | ||| | || |||| |||||||||| |||
Sbjct 1387129 AAAGTTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCT--CTCGTACTTTTCGTA 1387072
Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT-GGGCAGA 119007
|| || ||||| || ||||| | || | || || || || || | ||||| |
Sbjct 1387071 CAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGGCACA 1387013
Query 119008 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 119067
||||| ||||| || ||| || ||||||||||| || || |||||||| || |
Sbjct 1387012 TGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAG 1386953
Query 119068 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127
| |||| || || ||| ||| | || || | || ||||| || | || | |
Sbjct 1386952 CTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGA 1386893
Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG-- 119185
| || | || || |||||||| ||||| ||||| | |||| | || | | ||
Sbjct 1386892 ACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACC---AGGTCGCT 1386836
Query 119186 ----ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241
|||| |||||| || || | |||||| ||| || ||||| ||||| |||| ||
Sbjct 1386835 TGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGA 1386776
Query 119242 TACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTG 119299
|||| | ||| ||||| || || ||| || ||| | | |||| | || |||
Sbjct 1386775 TACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGATTCGGTG 1386718
Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359
| || || |||||||| || ||| ||| || || || || | |||| | |
Sbjct 1386717 GGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATC 1386658
Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419
|||||| ||||| || ||| |||| | | | |||||||| || | |||||
Sbjct 1386657 GTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGG 1386598
Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGAC 119477
| || ||||| |||||||| | ||| || | || || ||| | | |||| |||
Sbjct 1386597 CTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTGAC 1386540
Query 119478 ATCTTGTCGTAGGTCTCCAAGAC 119500
|| || ||| |||||||||||
Sbjct 1386539 ATGAGGTTGTATGTCTCCAAGAC 1386517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435153617360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |