Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03] 6 sequences; 38,047,942 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2 125 6e-24 >seq2 Length=8997558 Score = 125 bits (138), Expect = 6e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || || || || ||||||||||| ||||||| || || || || | | Sbjct 2573439 CCATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACTATTACCCTCGAGGTTGAGTCAT 2573380 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 | || | || || | ||||| || ||||| ||||| || ||||| || || |||| Sbjct 2573379 CTGATACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGATC 2573320 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | ||||| || || | ||||||||| || | || || | ||| | |||||||||| Sbjct 2573319 AGCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGATTACA 2573260 Query 27166 ACATTCAAAAGGAGTCGAC 27184 ||||||| ||||||||||| Sbjct 2573259 ACATTCAGAAGGAGTCGAC 2573241 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 ||||||||||| | || || ||||| || || | |||||| | || || | ||||| Sbjct 2572905 TGACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGACACTATCGACAACGTCAAGT 2572846 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || || || ||||| || || || || || ||||| ||||| || || | |||||||| Sbjct 2572845 CCAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATTTTCGCCGGCA 2572786 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | || | || ||| || ||| | ||||| |||||||| || ||||| || ||| | | Sbjct 2572785 AGCAGCTCGAGGACGGTCGAACCCTCTCCGACTACAACATCCAGAAGGAATCAACCCTTC 2572726 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGG 27214 | |||| | ||| | || ||||| Sbjct 2572725 ACCTGGTCCTTCGTCTTCGTGGTGG 2572701 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || |||||| | || || || || || || | ||| Sbjct 2573209 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 2573150 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || ||||| || ||||| || || ||||| Sbjct 2573149 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAG 2573090 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||||||||| || | || || | ||| | ||||| |||||| Sbjct 2573089 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 2573030 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 2573029 ATCCAGAAGGAGTCGAC 2573013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918367381120