Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03]
6 sequences; 38,047,942 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq3 181 1e-40
>seq3
Length=7792947
Score = 181 bits (200), Expect = 1e-40
Identities = 1163/1846 (63%), Gaps = 43/1846 (2%)
Strand=Plus/Minus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
|| ||||| || || | || || | | |||||| || |||||||| ||||| || |||
Sbjct 1388216 GTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGA 1388157
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901
|| || |||| || ||| |||||||| || | ||| |||| || ||
Sbjct 1388156 CCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATG 1388097
Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961
||||| || | |||||| ||||| ||||| || || | ||||| ||||| | | |
Sbjct 1388096 TGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACA 1388037
Query 76962 ATG-GTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG 77020
| ||| | ||| ||| ||||| | ||| ||| | | ||||| || | || |
Sbjct 1388036 ACCTGTCGCT-GAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGAT 1387978
Query 77021 GTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATT 77077
||| | | || || || ||||| ||| | || || ||||| ||| ||||
Sbjct 1387977 GTTGGGGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGA 1387918
Query 77078 CCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCC 77137
||| | | | || | | | | || || || || || | || || || ||
Sbjct 1387917 CCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCC 1387858
Query 77138 AGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 77197
|| | |||| || ||| || || ||| || || || | |||| ||||| ||
Sbjct 1387857 AGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCC 1387798
Query 77198 CAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 77257
| ||| || | ||| || || |||||||| || || | | ||| || | || |||
Sbjct 1387797 AAGAATCTGCGAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACC 1387738
Query 77258 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATC 77317
|| || ||| | ||| || || ||| |||||||| || || || ||||
Sbjct 1387737 GTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATT 1387678
Query 77318 CCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGG 77377
||| | ||| | || ||||| || | | ||| || || || | || || ||
Sbjct 1387677 CCACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGG 1387618
Query 77378 TCCTTCTGTTTCAGCTAGTT-CACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGA 77436
||||| | || |||| |||| || | || ||| || || || ||||
Sbjct 1387617 ACCTTCCTCCTTGGCGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGA 1387559
Query 77437 AAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAG--AAT 77494
| || | ||| || || || | || ||| | ||||| || ||| | | ||
Sbjct 1387558 AGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAGGGC--ATGCGGAGGGCAAG 1387501
Query 77495 AAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 77554
||||||||| || | || || || |||| |||||| |||| || | | | ||| |
Sbjct 1387500 AAAGGCATCAGCGAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTT 1387441
Query 77555 TTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAAC 77614
||| ||| | | ||| || | || | ||| || || || || | ||| | |||||
Sbjct 1387440 ACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAAC 1387381
Query 77615 TACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCT--ATA----ACAAA 77668
|||| | || || | || || || || | | ||||| ||| | |||
Sbjct 1387380 AACTTGAGTGACCTCGTGCAGCTTCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATAAA 1387321
Query 77669 CATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTG 77728
| || || | || || || || ||||| || ||||||| || | | ||||
Sbjct 1387320 AGAGGGCAGAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTC 1387261
Query 77729 TATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTT 77788
|| ||||| || || || || | | ||| || || || || | |||||| |||||
Sbjct 1387260 AATGATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTT 1387201
Query 77789 TTTATTGCA-TGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGA 77847
|||||| ||| ||||| || || || || || | ||||| || |||| | || |
Sbjct 1387200 GCGATTGCAGTGA-TCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAA 1387142
Query 77848 TAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCT---CTCTCTT 77903
||| | | ||| | | ||| ||| || || ||| ||| | | | ||||||
Sbjct 1387141 GAATGGCGTACCAAA-GTTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTC 1387086
Query 77904 TCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961
|| || || ||| | |||| |||||||| || || | ||| | | |||||||
Sbjct 1387085 TCGTACTTTTCGTACAGAGCC--TCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGC 1387028
Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021
|||| || |||||||| | | ||| || || | | || || || ||||| || ||||
Sbjct 1387027 ATTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGAT 1386968
Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081
|||| ||||| ||||| | || || || || | | || || || || |||||
Sbjct 1386967 CAGGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCT 1386908
Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141
|| ||||| || ||||| | | || | ||||||||||| || || || || |
Sbjct 1386907 TTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGG 1386848
Query 78142 CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCA 78201
| |||||||| || ||||| ||||| || | || | || ||||| || | || | ||
Sbjct 1386847 CACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCA 1386788
Query 78202 ACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGC 78261
||| |||| |||||||| || || ||||| || || | || ||| ||| | || |
Sbjct 1386787 GCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCAC 1386728
Query 78262 GAATATTACTAATGGAT-ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT 78320
| || | | | | | || || || || |||||||| || || | || |||
Sbjct 1386727 GGAT-TCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTC 1386669
Query 78321 TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380
|| | |||||||||||||| || || ||||| ||| |||| | || ||| || ||
Sbjct 1386668 TTGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAT 1386609
Query 78381 GACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440
|| | ||| | || ||| || || || ||||| || || |||||| || || |
Sbjct 1386608 GAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAAC 1386549
Query 78441 TTTTCAGAAAGTAGATTGTATGT-TTCAATA---GCTGATTCTATGTC-CCATTGATGAA 78495
|| || | || |||||||| | ||| | ||| | | | ||| || | |
Sbjct 1386548 TTGCTTGACATGAGGTTGTATGTCTCCAAGACACGCTCAATAT-CGTCACCCCAG----A 1386494
Query 78496 TTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTT 78555
|||| || || || ||||| | ||||||||| || | ||| | | || | || |
Sbjct 1386493 TTCCAACAGCGACTCGCATGATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCT 1386434
Query 78556 TCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601
| |||||||||| | ||| ||| || ||||||||||||||
Sbjct 1386433 GTAGCAAGTATGATCTGGACAAGGTTCGGAAGCCAAAATAGTTGTA 1386388
Score = 143 bits (158), Expect = 4e-29
Identities = 370/561 (66%), Gaps = 12/561 (2%)
Strand=Plus/Plus
Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199
||| ||||| || |||||||| ||||| | | ||| | ||||||||||| | ||
Sbjct 2175744 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 2175803
Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259
||| ||||| || ||||| || |||||||| || || | || || | || |||||
Sbjct 2175804 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 2175863
Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---G 48316
|| || || ||||| ||||| || ||| | || || | | | | || | |
Sbjct 2175864 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGGTAGAGTTCTTATCCTG 2175923
Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 48376
||||| || |||||||| |||||||| | ||||| || || || | || ||
Sbjct 2175924 GATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTT 2175983
Query 48377 AAAGAGAAAGtttttttCATTGCTA---TCTTTAACGTAAGTATCTATTAAAAGACTATA 48433
||||| || | | | | | || || | ||| ||||| || | || ||
Sbjct 2175984 GAAGAG---GTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTA 2176040
Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493
|||||||||| || || || || ||||| || || || || |||| || || |
Sbjct 2176041 TGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGG 2176100
Query 48494 GATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGC 48553
|||||| ||||| | ||||| ||| | | ||||||||| || || || || ||
Sbjct 2176101 GATCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGC 2176160
Query 48554 AGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATT 48610
||| || || || | | || || || |||| |||| ||||||| | || ||
Sbjct 2176161 AGCGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTT 2176220
Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670
|||||| | || ||| || || | ||| | || ||||||||||| || || ||||||||
Sbjct 2176221 CCAGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGC 2176280
Query 48671 TTTTTTATACATATTCCATAT 48691
|| || ||||| | ||| ||
Sbjct 2176281 CTTCTTGTACATTTGCCAGAT 2176301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668747899840
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