Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq524 145 2e-29 seq84 93.3 9e-14 >seq524 Length=29470 Score = 145 bits (160), Expect = 2e-29 Identities = 317/467 (68%), Gaps = 6/467 (1%) Strand=Plus/Minus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAG 230228 || |||||| |||||||||| |||| | |||||| ||||| || | ||| | || | Sbjct 2876 TCCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTAT-CT-TCTTCAGCGGTG 2819 Query 230229 TTTCTGCGCC-ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287 | ||| | ||||| ||||| ||| ||| | ||||| ||||| | || | Sbjct 2818 CCTTTGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCA 2759 Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA 230347 ||||| ||||| ||| || ||||||||||| | || | | || | | || Sbjct 2758 ACGAGCTCATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCCTGCCTCCTCCACTCTC 2699 Query 230348 AGCTCCAGAA-CAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAA 230406 | ||| || | || | || | ||| | || | | ||||| || || || || Sbjct 2698 ACCTCAAGGGTCGTGCCAGCAAGC-AGATGATCCAGGACATCATCACTGATGCCGTCACC 2640 Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAA 230466 | || |||||||| | ||| ||| | || ||| |||| | ||||||||| |||| Sbjct 2639 ATTGAGCAGGAGTTCCTCACTGAGGCTCTCCCCTGTGCCCTTCTCGGCATGAACTCTGAC 2580 Query 230467 CTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAG 230526 || ||| ||||| || || ||||| ||||| || | ||||||| ||||| ||||| Sbjct 2579 CTCATGAAGCAGTATATTGAGTTCGTCGCCGATCGTCTCCTTGTTGCTCTTGGCAACGAG 2520 Query 230527 AAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAG 230586 || || ||||| ||| |||||||| | || |||||| ||| || ||| || ||| Sbjct 2519 AAGGTCTACAAGGCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAG 2460 Query 230587 ACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 |||||||||||||| |||||||| ||||| |||| | | ||||| Sbjct 2459 ACCAACTTCTTCGAGAAGCGTGTTGCCGACTACCAGAAGGCCGGTGT 2413 >seq84 Length=83255 Score = 93.3 bits (102), Expect = 9e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 319812 GTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACA-TCCGCAGAGGGGAACCCTTCAA 319870 |||||| ||||| || ||| | |||| || | || || || |||| |||||| ||| Sbjct 75584 GTCGAGGTCGTGCTCGACGAAGACAGTCTTGACCTCACTCTGCTTAGGGAAACCCT-CAA 75526 Query 319871 GCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACA 319930 ||| |||| || |||||||| ||||| || || || | ||||| || ||||| | Sbjct 75525 CCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGACTTTCCGGAACCGTTGGGACCACAAA 75466 Query 319931 GACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCAC 319990 ||||||| || | || || || || || | || | ||| |||||||| || ||| Sbjct 75465 GACCGTAACGCTGACCACGCTTGAGACGGAGATGGGTCTGGTTGAGAAGAATCTTGGCAC 75406 Query 319991 CATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 | || || ||||| || ||| | || ||||||||||| Sbjct 75405 CGTAGGCAAGAGAGAAGGTACAGTTGCAAAGATCCTCACC 75366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057773513696750