Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2635 95.1 3e-14 seq913 86.0 1e-11 >seq2635 Length=144039 Score = 95.1 bits (104), Expect = 3e-14 Identities = 167/242 (69%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 248783 TGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGC 248842 ||||| ||| |||| ||| | | ||||| | ||| | | ||||| ||||| || Sbjct 60242 TGGACTCCGCCATTGTCTATGACCGCGATTTCCAATACCAATACTTTGGCTTCAAGACTT 60301 Query 248843 TGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGT 248902 ||||| ||| || |||||||| ||||| || ||||| || || || |||||||||| Sbjct 60302 TGGAGCGATCCTACCTCCTCAAGATTGACGGTAAGATTGTCGAGCGCCCTCAGCACATGA 60361 Query 248903 TGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACA 248962 | ||||| ||| |||| || || ||||| || ||| | || | ||||| || | Sbjct 60362 TCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGTCTTGGAGACATATA 60421 Query 248963 CCGGAATG---AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTA 249019 | ||| || || || | ||||||||| | || || ||||||||||| |||| Sbjct 60422 ACCTGATGTCCAGCAAATTCT---TTACACATGCCTCTCCCACACTCTTCAACGCTGGTA 60478 Query 249020 CC 249021 || Sbjct 60479 CC 60480 >seq913 Length=40912 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/180 (71%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 || || ||||||||| || | ||||| |||||||| ||| ||||||| ||||| || Sbjct 33893 TGCCCTCCTTTCAAGATCATCATCCTCGACGAGGCCGACTCCATGACACAAGACGCCCAA 33834 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 || || || ||||| ||||| || || | | || || ||||| ||| | ||| Sbjct 33833 AGTGCACTGCGACGAACCATGGAAACATACAGCAAGATTACTCGATTTTGTCTGATTTGC 33774 Query 254322 AACTACGT--GTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||||||| |||| || |||| |||||| || ||| ||| ||| ||||| |||| Sbjct 33773 AACTACGTCACTCGA--ATTATCGACCCGCTTGCCAGTCGATGCAGCAAATTTCGGTTCA 33716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073715152820800